RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
SNX2-205ENST00000506874 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
SNX2-205ENST00000506874 DEDD2Q8WXF8 326 aa12.18□□□□□ -0.46
SNX2-205ENST00000506874 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
SNX2-205ENST00000506874 SCAF4O95104 1147 aaKnown RBP12.17□□□□□ -0.46
SNX2-205ENST00000506874 CDS2O95674 445 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 DEFA4P12838 97 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
SNX2-205ENST00000506874 AKR1C4P17516 323 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 DHODHQ02127 395 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 KLK9Q2XQG4 91 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 FAM106AQ4KMX7 169 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 UXS1Q8NBZ7 420 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 LHFPL5Q8TAF8 219 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
SNX2-205ENST00000506874 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 MLXQ9UH92 298 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 KLK9Q9UKQ9 250 aa12.17□□□□□ -0.46
SNX2-205ENST00000506874 IGLV11-55A0A075B6I3 123 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 TMEM213A2RRL7 107 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 IL7P13232 177 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 HSD17B13Q7Z5P4 300 aaPredicted RBP12.16□□□□□ -0.46
SNX2-205ENST00000506874 SELENOHQ8IZQ5 122 aaKnown RBP12.16□□□□□ -0.46
SNX2-205ENST00000506874 RNASE11Q8TAA1 199 aaKnown RBP12.16□□□□□ -0.46
SNX2-205ENST00000506874 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
SNX2-205ENST00000506874 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 PRR13Q9NZ81 148 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 KCNIP3Q9Y2W7 256 aa12.16□□□□□ -0.46
SNX2-205ENST00000506874 A0A0B4J293 547 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
SNX2-205ENST00000506874 SUPT4H1P63272 117 aaKnown RBP12.15□□□□□ -0.46
SNX2-205ENST00000506874 TMEM187Q14656 261 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 TMEM268Q5VZI3 342 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.46
SNX2-205ENST00000506874 GALNT14Q96FL9 552 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
SNX2-205ENST00000506874 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
SNX2-205ENST00000506874 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 CLEC3BP05452 202 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 CCR6P51684 374 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 OVOL2Q9BRP0 275 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 TMEM56-RWDD3S4R434 201 aa12.14□□□□□ -0.47
SNX2-205ENST00000506874 LOC102724200A0A096LPH7 203 aaPredicted RBP12.13□□□□□ -0.47
SNX2-205ENST00000506874 NAP1L6A6NFF2 107 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 A8MWP6 167 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 MFAP2P55001 183 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 SLC25A24Q6NUK1 477 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 UNQ9165/PRO28630Q6UXU0 137 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 Q6ZRM9 215 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 FAM219AQ8IW50 185 aa12.13□□□□□ -0.47
SNX2-205ENST00000506874 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
SNX2-205ENST00000506874 TRBV7-1A0A0A6YYK4 115 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 CYB5BO43169 146 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 GPR183P32249 361 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 RBMS2Q15434 407 aaKnown RBP12.12□□□□□ -0.47
SNX2-205ENST00000506874 ANKRD55Q3KP44 614 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
SNX2-205ENST00000506874 LINC00299Q6ZSB3 139 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 OR2C3Q8N628 320 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 IL22RA2Q969J5 263 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 GPR146Q96CH1 333 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 BATF3Q9NR55 127 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 THYN1Q9P016 225 aa12.12□□□□□ -0.47
SNX2-205ENST00000506874 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 IFNA17P01571 189 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 ANXA3P12429 323 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 TMEM128Q5BJH2 165 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 CENPSQ8N2Z9 138 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
SNX2-205ENST00000506874 PDCD10Q9BUL8 212 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 PTTG2Q9NZH5 202 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 CACNG5Q9UF02 275 aa12.11□□□□□ -0.47
SNX2-205ENST00000506874 CENPXA8MT69 81 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 NDUFB6O95139 128 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 LY6G6CO95867 125 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 VAMP1P23763 118 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 BTCP35070 178 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 SRPXP78539 464 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 PLET1Q6UQ28 207 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 LGI3Q8N145 548 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
SNX2-205ENST00000506874 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
SNX2-205ENST00000506874 IGHV3-21A0A0B4J1V1 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms