RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 OR51E2Q9H255 320 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 RIMS4Q9H426 269 aaPredicted RBP4.9□□□□□ -1.63
VCAN-206ENST00000505615 TMEM14BQ9NUH8 114 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 MGAT4CQ9UBM8 478 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 MGAT4AQ9UM21 535 aa4.9□□□□□ -1.63
VCAN-206ENST00000505615 HELTA6NFD8 242 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 FOXI3A8MTJ6 420 aaPredicted RBP4.89□□□□□ -1.63
VCAN-206ENST00000505615 LALBAP00709 142 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
VCAN-206ENST00000505615 SRMP19623 302 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 CELP19835 753 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 MAS1LP35410 378 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
VCAN-206ENST00000505615 PSMD7P51665 324 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 ARFRP1Q13795 201 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 Q499Y3 187 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 CCDC58Q4VC31 144 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 MEDAGQ5VYS4 303 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 SPSB3Q6PJ21 355 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 VN1R17PQ8TDU5 208 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 GGHQ92820 318 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 OR10C1Q96KK4 312 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 PGLYRP3Q96LB9 341 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 UQCC2Q9BRT2 126 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 ATG101Q9BSB4 218 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 NDUFA13Q9P0J0 144 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 OAZ3Q9UMX2 235 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 TMED3Q9Y3Q3 217 aa4.89□□□□□ -1.63
VCAN-206ENST00000505615 IGHV3OR16-13A0A075B7E8 117 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 TRBV6-7A0A0A0MS04 114 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 IGHV3-74A0A0B4J1X5 117 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 TRAV2A0A0B4J234 112 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 A0A1W2PPK0 400 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 TMEM14DPA8MWL7 114 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 TRDCB7Z8K6 153 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 G3V2T6 193 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 NUPL2O15504 423 aaKnown RBP4.88□□□□□ -1.63
VCAN-206ENST00000505615 SOCS1O15524 211 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 DEFA4P12838 97 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 SERPINB10P48595 397 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 OR2B8PP59922 312 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 RPL30P62888 115 aaKnown RBP4.88□□□□□ -1.63
VCAN-206ENST00000505615 QRFPP83859 136 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 ATP6AP1Q15904 470 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 OR2B11Q5JQS5 317 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 NRARPQ7Z6K4 114 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 OR52I1Q8NGK6 324 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 OR4A4PQ8NGN8 299 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 DGCR14Q96DF8 476 aaKnown RBP4.88□□□□□ -1.63
VCAN-206ENST00000505615 DERL3Q96Q80 235 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 SLC29A1Q99808 456 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 C12orf4Q9NQ89 552 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 PLEKHJ1Q9NW61 149 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 CKLFQ9UBR5 152 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 DKK2Q9UBU2 259 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 GHRLQ9UBU3 117 aa4.88□□□□□ -1.63
VCAN-206ENST00000505615 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 BET1O15155 118 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 FABP7O15540 132 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 DCTN3O75935 186 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 MBPP02686 304 aaPredicted RBP4.87□□□□□ -1.63
VCAN-206ENST00000505615 UBBP0CG47 229 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 SPART-AS1P0CW21 52 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 HTN3P15516 51 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 HLA-GP17693 338 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 CDKN1BP46527 198 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 TMEM50BP56557 158 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 KRTAP10-1P60331 282 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 SSTP61278 116 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 RPL8P62917 257 aaKnown RBP4.87□□□□□ -1.63
VCAN-206ENST00000505615 CTAG1AP78358 180 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 DLK1P80370 383 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 FLOT2Q14254 428 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 RNF151Q2KHN1 245 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 FAM222AQ5U5X8 452 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 CADM3Q8N126 398 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 C15orf53Q8NAA6 179 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 VSTM2AQ8TAG5 236 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 MOB3AQ96BX8 217 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 NIPSNAP3BQ9BS92 247 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 FAM107BQ9H098 131 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 LPAR5Q9H1C0 372 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 VSIRQ9H7M9 311 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 AMBNQ9NP70 447 aa4.87□□□□□ -1.63
VCAN-206ENST00000505615 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 LOC100506127A0A0U1RQW1 187 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 FAM240BA0A1B0GVZ2 78 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 A0A1W2PPQ1 181 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 ZNF705FA8MVS1 300 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 K7EIM0 57 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 K7EQG2 157 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 DNASE2O00115 360 aaPredicted RBP4.86□□□□□ -1.63
VCAN-206ENST00000505615 IGLV2-14P01704 120 aa4.86□□□□□ -1.63
VCAN-206ENST00000505615 APOHP02749 345 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms