RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 Q6ZRM9 215 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
DDX41-204ENST00000504807 H2BFWTQ7Z2G1 175 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 ZNF114Q8NC26 417 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 OR13C8Q8NGS7 320 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 LHFPL5Q8TAF8 219 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 SPAG8Q99932 426 aaPredicted RBP9.71□□□□□ -0.86
DDX41-204ENST00000504807 SMPXQ9UHP9 88 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 CHEK1O14757 476 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 PGAM2P15259 253 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 HSPE1P61604 102 aaKnown RBP9.7□□□□□ -0.86
DDX41-204ENST00000504807 RNASE10Q5GAN6 216 aaKnown RBP9.7□□□□□ -0.86
DDX41-204ENST00000504807 PVRIGQ6DKI7 326 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 LPCAT3Q6P1A2 487 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 MARCH1Q8TCQ1 289 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 PINX1Q96BK5 328 aaKnown RBP9.7□□□□□ -0.86
DDX41-204ENST00000504807 OR10C1Q96KK4 312 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 NXF2Q9GZY0 626 aaKnown RBP9.7□□□□□ -0.86
DDX41-204ENST00000504807 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
DDX41-204ENST00000504807 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 C15orf62A8K5M9 175 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 K7EMT4 169 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 RNASE2P10153 161 aaKnown RBP9.69□□□□□ -0.86
DDX41-204ENST00000504807 FCGR2BP31994 310 aaPredicted RBP9.69□□□□□ -0.86
DDX41-204ENST00000504807 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 FAM90A2PQ658T7 463 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 OR4A16Q8NH70 328 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 ATP6V0BQ99437 205 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 TSC22D3Q99576 134 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 RTBDNQ9BSG5 229 aaPredicted RBP9.69□□□□□ -0.86
DDX41-204ENST00000504807 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 FNDC4Q9H6D8 234 aaPredicted RBP9.69□□□□□ -0.86
DDX41-204ENST00000504807 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 FKBP11Q9NYL4 201 aa9.69□□□□□ -0.86
DDX41-204ENST00000504807 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 C3orf85A0A1B0GTC6 90 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 A0A1B0GU03 582 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
DDX41-204ENST00000504807 ETV6P41212 452 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 TFPI2P48307 235 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 ARRDC1Q8N5I2 433 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 FAM24BQ8N5W8 94 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 TMEM229BQ8NBD8 167 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 PRR13Q9NZ81 148 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
DDX41-204ENST00000504807 IGHV3-66A0A0C4DH42 116 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 NUPL2O15504 423 aaKnown RBP9.67□□□□□ -0.86
DDX41-204ENST00000504807 UCP1P25874 307 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 MFAP4P55083 255 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 ANKRD55Q3KP44 614 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 SCGB2B2Q4G0G5 96 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 STEAP1BQ6NZ63 245 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 MZT2AQ6P582 158 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 GBGT1Q8N5D6 347 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 TMEM116Q8NCL8 245 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 TERB2Q8NHR7 220 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 ST8SIA2Q92186 375 aa9.67□□□□□ -0.86
DDX41-204ENST00000504807 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
DDX41-204ENST00000504807 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 CYB5BO43169 146 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 YIF1AO95070 293 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 RAB3DO95716 219 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 OR5AC1P0C628 307 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 BSXQ3C1V8 233 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 WFDC3Q8IUB2 231 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 DYNC2LI1Q8TCX1 351 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 TMEM170AQ8WVE7 144 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 MRPS26Q9BYN8 205 aaKnown RBP9.66□□□□□ -0.86
DDX41-204ENST00000504807 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
DDX41-204ENST00000504807 GABARAPH6UMI1 98 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 SPRY2O43597 315 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 GNG7O60262 68 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 TMEM50AO95807 157 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 TBPP20226 339 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 S100GP29377 79 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 AKR1C2P52895 323 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 MEF2DQ14814 521 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 TRIM16LQ309B1 348 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 LYG2Q86SG7 212 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 OR4C16Q8NGL9 310 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 SMIM4Q8WVI0 70 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 AP3S1Q92572 193 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 TMEM230Q96A57 120 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 RNF183Q96D59 192 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 TXN2Q99757 166 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 PUS1Q9Y606 427 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDX41-204ENST00000504807 MUC4Q99102 2169 aa9.65□□□□□ -0.86
DDX41-204ENST00000504807 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
DDX41-204ENST00000504807 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms