RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 HTR2BP41595 481 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 SUB1P53999 127 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 FHL3Q13643 280 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 DEFB136Q30KP8 78 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 UXS1Q8NBZ7 420 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 OR11H1Q8NG94 326 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 OR1N2Q8NGR9 330 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 VN1R17PQ8TDU5 208 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 DPF1Q92782 380 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 CXorf58Q96LI9 332 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 HIPK2Q9H2X6 1198 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 RBKSQ9H477 322 aa9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 HEYLQ9NQ87 328 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-208ENST00000504489 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 NXPH3O95157 252 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 OR8U8P0C7N1 319 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 ID3Q02535 119 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 EXOSC2Q13868 293 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 RGS21Q2M5E4 152 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 OR4D5Q8NGN0 318 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 SORL1Q92673 2214 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 OR10C1Q96KK4 312 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 DUX3Q96PT4 197 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 RANGRFQ9HD47 186 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 PEF1Q9UBV8 284 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-208ENST00000504489 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 A0A087WW49 117 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 C7orf66A4D0T2 115 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 ANKRD34BA5PLL1 514 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 MFSD2BA6NFX1 497 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 LINC01619G3V211 115 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 K7EIM0 57 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 CORTO00230 105 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 SYNGR2O43760 224 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 LY86O95711 162 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 NKX2-1P43699 371 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 IAH1Q2TAA2 248 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 C2orf83Q53S99 150 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 NOXA1Q86UR1 476 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 ZBTB8BQ8NAP8 495 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 ZNF502Q8TBZ5 544 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 U3KQ87 197 aa9.17□□□□□ -0.94
PDLIM5-208ENST00000504489 MGAM2Q2M2H8 2515 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 CMYA5Q8N3K9 4069 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 I3L2K1 104 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 CCSO14618 274 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 ZP3P21754 424 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 GSG1LQ6UXU4 331 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 SLC24A4Q8NFF2 622 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 SCARB1Q8WTV0 552 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 CCDC140Q96MF4 163 aa9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 CIB3Q96Q77 187 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-208ENST00000504489 FAM25EA8MYX2 175 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 BMPR1BO00238 502 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 MT-CO2P00403 227 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 NPY1RP25929 384 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 C11orf87Q6NUJ2 197 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 C2orf50Q96LR7 162 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 MAGT1Q9H0U3 335 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 C21orf62Q9NYP8 219 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 GSKIPQ9P0R6 139 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 S4R3C0 116 aa9.15□□□□□ -0.94
PDLIM5-208ENST00000504489 WRBO00258 174 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 GGCTO75223 188 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 IFNA10P01566 189 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 CLEC3BP05452 202 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 FCGR2BP31994 310 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 SLURP1P55000 103 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 MFAP4P55083 255 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 POLR2GP62487 172 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 IL15RAQ13261 267 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 OXA1LQ15070 435 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 PINX1Q96BK5 328 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 TXN2Q99757 166 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 GAR1Q9NY12 217 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 ALG5Q9Y673 324 aa9.14□□□□□ -0.95
PDLIM5-208ENST00000504489 IGHV3-21A0A0B4J1V1 117 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 RPS10-NUDT3A0A1W2PQS6 291 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms