RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 C19orf35Q6ZS72 473 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 OR4A5Q8NH83 315 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 TMEM68Q96MH6 324 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 CHRDL1Q9BU40 450 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 NRN1Q9NPD7 142 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 TBL2Q9Y4P3 447 aaKnown RBP12.19□□□□□ -0.46
SNF8-203ENST00000504000 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 BMPR1BO00238 502 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 ZNF324O75467 553 aaPredicted RBP12.19□□□□□ -0.46
SNF8-203ENST00000504000 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 IRF2P14316 349 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
SNF8-203ENST00000504000 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 A0A1W2PN81 502 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 DLEU1O43261 78 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
SNF8-203ENST00000504000 PRRX1P54821 245 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
SNF8-203ENST00000504000 MEF2CQ06413 473 aaPredicted RBP12.18□□□□□ -0.46
SNF8-203ENST00000504000 TMEM177Q53S58 311 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 FAM71F2Q6NXP2 309 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 MBD6Q96DN6 1003 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 SMIM12Q96EX1 92 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 SLC25A2Q9BXI2 301 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
SNF8-203ENST00000504000 TANC2Q9HCD6 1990 aa12.18□□□□□ -0.46
SNF8-203ENST00000504000 DSCAMO60469 2012 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
SNF8-203ENST00000504000 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
SNF8-203ENST00000504000 TNFSF4P23510 183 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 AMTP48728 403 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 ZNF474Q6S9Z5 364 aaPredicted RBP12.17□□□□□ -0.46
SNF8-203ENST00000504000 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 TMEM208Q9BTX3 173 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 GAL3ST2Q9H3Q3 398 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
SNF8-203ENST00000504000 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 GPR179Q6PRD1 2367 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 M0R296 226 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 CEACAM4O75871 244 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 APOA2P02652 100 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 APCSP02743 223 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 GNG10P50151 68 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 RPL8P62917 257 aaKnown RBP12.17□□□□□ -0.46
SNF8-203ENST00000504000 FAM201AQ5SY85 155 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 VSTM2AQ8TAG5 236 aa12.17□□□□□ -0.46
SNF8-203ENST00000504000 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
SNF8-203ENST00000504000 GATA2P23769 480 aaPredicted RBP12.16□□□□□ -0.46
SNF8-203ENST00000504000 SRIP30626 198 aa12.16□□□□□ -0.46
SNF8-203ENST00000504000 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
SNF8-203ENST00000504000 FXYD3Q14802 87 aa12.16□□□□□ -0.46
SNF8-203ENST00000504000 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
SNF8-203ENST00000504000 TMEM167AQ8TBQ9 72 aa12.16□□□□□ -0.46
SNF8-203ENST00000504000 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
SNF8-203ENST00000504000 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
SNF8-203ENST00000504000 LINC00614P0C842 121 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 COL8A2P25067 703 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 SUB1P53999 127 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNF8-203ENST00000504000 KRTDAPP60985 99 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
SNF8-203ENST00000504000 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
SNF8-203ENST00000504000 THAP8Q8NA92 274 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 CCL13Q99616 98 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 UQCR10Q9UDW1 63 aa12.15□□□□□ -0.46
SNF8-203ENST00000504000 H0YJW9 148 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 MGST1P10620 155 aaKnown RBP12.14□□□□□ -0.47
SNF8-203ENST00000504000 G0S2P27469 103 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 BPIFB3P59826 476 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 COL5A1-AS1Q5SY13 56 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 NIT1Q86X76 327 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 KLHDC1Q8N7A1 406 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 STXBP6Q8NFX7 210 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 RNF114Q9Y508 228 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 OR2J3O76001 311 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
SNF8-203ENST00000504000 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
SNF8-203ENST00000504000 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms