RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 C5orf66Q9H5L9 145 aa13.7□□□□□ -0.22
RNF4-204ENST00000503659 DAZ1Q9NQZ3 744 aaKnown RBP13.7□□□□□ -0.22
RNF4-204ENST00000503659 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 DISC1C4P0D8 188 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 INS-IGF2F8WCM5 200 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 B3GALNT1O75752 331 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 MT-CO2P00403 227 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 CTSGP08311 255 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 OR5AC1P0C628 307 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 TNFSF8P32971 234 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 SURF2Q15527 256 aaPredicted RBP13.69□□□□□ -0.22
RNF4-204ENST00000503659 MCFD2Q8NI22 146 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 NAA60Q9H7X0 242 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 SRD5A3Q9H8P0 318 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 EDA2RQ9HAV5 297 aa13.69□□□□□ -0.22
RNF4-204ENST00000503659 C14orf166Q9Y224 244 aaKnown RBP13.69□□□□□ -0.22
RNF4-204ENST00000503659 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 ATG12O94817 140 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 CDS2O95674 445 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 IGHV3-48P01763 117 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 FCGR2BP31994 310 aaPredicted RBP13.68□□□□□ -0.22
RNF4-204ENST00000503659 ERHP84090 104 aaKnown RBP13.68□□□□□ -0.22
RNF4-204ENST00000503659 Q6ZRM9 215 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 SLC35G3Q8N808 338 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 OR51S1Q8NGJ8 323 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 GLYATL2Q8WU03 294 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 PRRT1Q99946 306 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 TMEM222Q9H0R3 208 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 RSL24D1Q9UHA3 163 aaKnown RBP13.68□□□□□ -0.22
RNF4-204ENST00000503659 GPR132Q9UNW8 380 aa13.68□□□□□ -0.22
RNF4-204ENST00000503659 DYNC2H1Q8NCM8 4307 aaKnown RBP13.68□□□□□ -0.22
RNF4-204ENST00000503659 IFNA17P01571 189 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 MFAP4P55083 255 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 PVRIGQ6DKI7 326 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 SLC16A13Q7RTY0 426 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 OR52B4Q8NGK2 314 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 PINX1Q96BK5 328 aaKnown RBP13.67□□□□□ -0.22
RNF4-204ENST00000503659 TXN2Q99757 166 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 C20orf24Q9BUV8 137 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 RETNQ9HD89 108 aa13.67□□□□□ -0.22
RNF4-204ENST00000503659 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
RNF4-204ENST00000503659 CSMD3Q7Z407 3707 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 TEX13DA0A0J9YY54 714 aaPredicted RBP13.66□□□□□ -0.22
RNF4-204ENST00000503659 FABP12A6NFH5 140 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 CRYM-AS1A6NIL9 109 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 ZNF207O43670 478 aaKnown RBP13.66□□□□□ -0.22
RNF4-204ENST00000503659 ETV6P41212 452 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 TMEM230Q96A57 120 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
RNF4-204ENST00000503659 HIPK2Q9H2X6 1198 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 TENM2Q9NT68 2774 aa13.66□□□□□ -0.22
RNF4-204ENST00000503659 C15orf62A8K5M9 175 aa13.65□□□□□ -0.22
RNF4-204ENST00000503659 K7EMT4 169 aa13.65□□□□□ -0.22
RNF4-204ENST00000503659 NUPL2O15504 423 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 RNASE2P10153 161 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 RELQ04864 619 aaPredicted RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 RBPMS2Q6ZRY4 209 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 SELENOHQ8IZQ5 122 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 RNASE11Q8TAA1 199 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 PDCD10Q9BUL8 212 aa13.65□□□□□ -0.22
RNF4-204ENST00000503659 RBM38Q9H0Z9 239 aaKnown RBP13.65□□□□□ -0.22
RNF4-204ENST00000503659 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
RNF4-204ENST00000503659 TSPAN4O14817 238 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 SNCAP37840 140 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
RNF4-204ENST00000503659 DHODHQ02127 395 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 BSXQ3C1V8 233 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 ANKRD55Q3KP44 614 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 TRIM63Q969Q1 353 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 OR10C1Q96KK4 312 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 SPAG8Q99932 426 aaPredicted RBP13.64□□□□□ -0.23
RNF4-204ENST00000503659 V9GYH0 126 aa13.64□□□□□ -0.23
RNF4-204ENST00000503659 GNG7O60262 68 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 TMEM268Q5VZI3 342 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 MCUBQ9NWR8 336 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 TMEM56-RWDD3S4R434 201 aa13.63□□□□□ -0.23
RNF4-204ENST00000503659 SPCS3P61009 180 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 KLF9Q13886 244 aaPredicted RBP13.62□□□□□ -0.23
RNF4-204ENST00000503659 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 GALNT14Q96FL9 552 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 FNDC4Q9H6D8 234 aaPredicted RBP13.62□□□□□ -0.23
RNF4-204ENST00000503659 PRR13Q9NZ81 148 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 MRPL36Q9P0J6 103 aaKnown RBP13.62□□□□□ -0.23
RNF4-204ENST00000503659 CACNG5Q9UF02 275 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 SMPXQ9UHP9 88 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 SCP2D1Q9UJQ7 156 aa13.62□□□□□ -0.23
RNF4-204ENST00000503659 IGHV7-4-1A0A0J9YVY3 117 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 LCE6AA0A183 80 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 CORTO00230 105 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 CHEK1O14757 476 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 YIF1AO95070 293 aa13.61□□□□□ -0.23
RNF4-204ENST00000503659 SUPT4H1P63272 117 aaKnown RBP13.61□□□□□ -0.23
RNF4-204ENST00000503659 TMEM187Q14656 261 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms