RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TMEM167BQ9NRX6 74 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 TECRQ9NZ01 308 aaKnown RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 ARL2-SNX15V9GYD0 113 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 MUC6Q6W4X9 2439 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 POLEQ07864 2286 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 GGTLC3B5MD39 225 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 DLL1O00548 723 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 ADMP35318 185 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 ATP5IP56385 69 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-204ENST00000501271 PKIAP61925 76 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 WT1-ASQ06250 92 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 CENPWQ5EE01 88 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 MORN5Q5VZ52 161 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 GBGT1Q8N5D6 347 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 IL36BQ9NZH7 164 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 PSMB11A5LHX3 300 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 NDUFB3O43676 98 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 IGLV2-23P01705 113 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-204ENST00000501271 GPX4P36969 197 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-204ENST00000501271 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-204ENST00000501271 DEFA6Q01524 100 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF90Q03938 601 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 LURAP1LQ8IV03 231 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM256Q8N2U0 113 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 OR4C13Q8NGP0 309 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM167AQ8TBQ9 72 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 RNASE6Q93091 150 aaKnown RBP7.98□□□□□ -1.13
CLIP1-204ENST00000501271 ST6GALNAC6Q969X2 333 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 LY96Q9Y6Y9 160 aa7.98□□□□□ -1.13
CLIP1-204ENST00000501271 GATCO43716 136 aaKnown RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 USF1P22415 310 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 CBLN1P23435 193 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 DLX6P56179 175 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 LRRC10Q5BKY1 277 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 PDPNQ86YL7 162 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 PNKDQ8N490 385 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF596Q8TC21 504 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM18Q96B42 140 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 SLC25A33Q9BSK2 321 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 FNDC4Q9H6D8 234 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 V9GYV3 84 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 TRAV5A0A0B4J249 113 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 HELTA6NFD8 242 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 SHISA9B4DS77 424 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 INS-IGF2F8WCM5 200 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 TSTD3H0UI37 97 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 NUPR1O60356 82 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 FRMD6-AS1P0C7T7 363 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 DDTP30046 118 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 GNG4P50150 75 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 ERVFC1-1P60608 527 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 FAM71F2Q6NXP2 309 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 CACNG8Q8WXS5 425 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 RITA1Q96K30 269 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 SLC25A2Q9BXI2 301 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF430Q9H8G1 570 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF835Q9Y2P0 537 aa7.97□□□□□ -1.13
CLIP1-204ENST00000501271 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 E7EQL1 145 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 GCGP01275 180 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 IGHV3-48P01763 117 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 C8orf88P0DMB2 117 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 LGALS4P56470 323 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 TAS2R45P59539 299 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
CLIP1-204ENST00000501271 LINC00311Q8N616 119 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 TMEM186Q96B77 213 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 FAM167A-AS1Q96KT0 104 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 C19orf24Q9BVV8 132 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 DYNLRB1Q9NP97 96 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 WASHC3Q9Y3C0 194 aa7.96□□□□□ -1.14
CLIP1-204ENST00000501271 A0A1W2PN81 502 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 ZNF705GA8MUZ8 300 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-204ENST00000501271 SLC25A17O43808 307 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 PAX1P15863 534 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 SUMO1P63165 101 aaKnown RBP7.95□□□□□ -1.14
CLIP1-204ENST00000501271 MRGPRG-AS1Q2M3A8 158 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 RPEL1Q2QD12 228 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 TMEM155Q4W5P6 130 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 MMD2Q8IY49 270 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 ZNF664Q8N3J9 261 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 C8orf31Q8N9H6 132 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 OR4A5Q8NH83 315 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 VSTM2AQ8TAG5 236 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
CLIP1-204ENST00000501271 MRPL36Q9P0J6 103 aaKnown RBP7.95□□□□□ -1.14
CLIP1-204ENST00000501271 ZZEF1O43149 2961 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 IGKV1D-37A0A075B6S9 117 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 A0A087X0M5 115 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 A0A1B0GX30 115 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 REG1AP05451 166 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 NBL1P41271 181 aa7.95□□□□□ -1.14
CLIP1-204ENST00000501271 ZNF137PP52743 207 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms