RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CACNG5Q9UF02 275 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 A0A0B4J2A0 478 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 C2orf70A6NJV1 201 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 I3L2K1 104 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 MT-CO2P00403 227 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 SULT1A3P0DMM9 295 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 SULT1A4P0DMN0 295 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 FOLR2P14207 255 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 CBLN1P23435 193 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 CCR6P51684 374 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 MFAP4P55083 255 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 RBMS2Q15434 407 aaKnown RBP9.72□□□□□ -0.85
HSPG2-213ENST00000498495 LCN12Q6JVE5 192 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 OR2K2Q8NGT1 345 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 SDHCQ99643 169 aaPredicted RBP9.72□□□□□ -0.85
HSPG2-213ENST00000498495 TXN2Q99757 166 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 B9D2Q9BPU9 175 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 CACFD1Q9UGQ2 172 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 SHPKQ9UHJ6 478 aa9.72□□□□□ -0.85
HSPG2-213ENST00000498495 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.86
HSPG2-213ENST00000498495 VAMP1P23763 118 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 DEFB114Q30KQ6 69 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 AARDQ4LEZ3 155 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 TM4SF20Q53R12 229 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 ADAMTSL5Q6ZMM2 481 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 CENPSQ8N2Z9 138 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 DUSP18Q8NEJ0 188 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
HSPG2-213ENST00000498495 ZNF436Q9C0F3 470 aaPredicted RBP9.71□□□□□ -0.86
HSPG2-213ENST00000498495 HEYLQ9NQ87 328 aaPredicted RBP9.71□□□□□ -0.86
HSPG2-213ENST00000498495 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.86
HSPG2-213ENST00000498495 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
HSPG2-213ENST00000498495 DNAH3Q8TD57 4116 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 A6NHS1 94 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 CORTO00230 105 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 SFT2D2O95562 160 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 CTSGP08311 255 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 IL7P13232 177 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 EDN2P20800 178 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 FCGR2BP31994 310 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 CD300EQ496F6 205 aaPredicted RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 UXS1Q8NBZ7 420 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 HIPK2Q9H2X6 1198 aa9.7□□□□□ -0.86
HSPG2-213ENST00000498495 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
HSPG2-213ENST00000498495 DUXBA0A1W2PPF3 345 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 TMEM213A2RRL7 107 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 IZUMO1RA6ND01 250 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 A8MWP6 167 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 NDUFA4O00483 81 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 GNG7O60262 68 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 NDUFB6O95139 128 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 NXPH3O95157 252 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 ADMP35318 185 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 HTR2BP41595 481 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 NPBWR1P48145 328 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
HSPG2-213ENST00000498495 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 SMCO1Q147U7 214 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 CNPY1Q3B7I2 92 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 NMSQ5H8A3 153 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 LINC00299Q6ZSB3 139 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 GTSCR1Q86UQ5 136 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 Q8N1Y9 231 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 OR1S1Q8NH92 325 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 CACNG8Q8WXS5 425 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 SORL1Q92673 2214 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 C20orf24Q9BUV8 137 aa9.69□□□□□ -0.86
HSPG2-213ENST00000498495 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
HSPG2-213ENST00000498495 A0A1B0GU03 582 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 OPRK1P41145 380 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 UBE2MP61081 183 aaKnown RBP9.68□□□□□ -0.86
HSPG2-213ENST00000498495 GUCA2BQ16661 112 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 ANKRD55Q3KP44 614 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 LRTM2Q8N967 370 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 TMEM190Q8WZ59 177 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 TMED3Q9Y3Q3 217 aa9.68□□□□□ -0.86
HSPG2-213ENST00000498495 ZNF785A8K8V0 405 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 K7EMT4 169 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 YIF1AO95070 293 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 TMEM50AO95807 157 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 NHLRC4P0CG21 123 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-213ENST00000498495 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 MLANAQ16655 118 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 BSXQ3C1V8 233 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
HSPG2-213ENST00000498495 NOXA1Q86UR1 476 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms