RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CELA1Q9UNI1 258 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 TRDV1A0A1B0GX56 115 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 NOTOA8MTQ0 251 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 MT-CO2P00403 227 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 IFNA10P01566 189 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 RLN1P04808 185 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 F2RP25116 425 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 G6PCP35575 357 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 HERV-K104P61576 105 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 TOMM20LQ6UXN7 152 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 ZNF367Q7RTV3 350 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 TPRA1Q86W33 373 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 HOGA1Q86XE5 327 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 PINX1Q96BK5 328 aaKnown RBP10.05□□□□□ -0.8
CCDC58-207ENST00000498466 NDUFB11Q9NX14 153 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 FKBP11Q9NYL4 201 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 DAPK2Q9UIK4 370 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 PRNDQ9UKY0 176 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 TBC1D24Q9ULP9 559 aa10.05□□□□□ -0.8
CCDC58-207ENST00000498466 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 KNCNA6PVL3 124 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 GNRHRP30968 328 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 LPAR6P43657 344 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 UBE2UQ5VVX9 321 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 LGALS14Q8TCE9 139 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 FCAMRQ8WWV6 532 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 BORCS5Q969J3 196 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 TMEM231Q9H6L2 316 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 RHBDL2Q9NX52 303 aa10.04□□□□□ -0.8
CCDC58-207ENST00000498466 TRAV18A0A075B6X5 111 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 DBX1A6NMT0 343 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 EBAG9O00559 213 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 IFNA21P01568 189 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 IFNA17P01571 189 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 TBCEQ15813 527 aaPredicted RBP10.03□□□□□ -0.8
CCDC58-207ENST00000498466 SOHLH1Q5JUK2 328 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 STXBP6Q8NFX7 210 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 MOB3AQ96BX8 217 aa10.03□□□□□ -0.8
CCDC58-207ENST00000498466 PUS1Q9Y606 427 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC58-207ENST00000498466 PGLYRP1O75594 196 aaPredicted RBP10.02□□□□□ -0.81
CCDC58-207ENST00000498466 ZNF688P0C7X2 276 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 NPY1RP25929 384 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 ACTL10Q5JWF8 245 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 CADM3Q8N126 398 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 OR5AP2Q8NGF4 316 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 TSC22D3Q99576 134 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
CCDC58-207ENST00000498466 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
CCDC58-207ENST00000498466 K7EQG2 157 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 NPBWR1P48145 328 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 AQP4P55087 323 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 GRAMD2BQ96HH9 432 aa10.01□□□□□ -0.81
CCDC58-207ENST00000498466 A0A1W2PS18 150 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 NPPCP23582 126 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 SFXN4Q6P4A7 337 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 Q6ZR54 194 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 Q6ZRM9 215 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 CMTM1Q8IZ96 169 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 OR4A16Q8NH70 328 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 ZNF2Q9BSG1 426 aaPredicted RBP10□□□□□ -0.81
CCDC58-207ENST00000498466 EHFQ9NZC4 300 aa10□□□□□ -0.81
CCDC58-207ENST00000498466 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 A0A1B0GU03 582 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 CBX5P45973 191 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
CCDC58-207ENST00000498466 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 OR5H6Q8NGV6 325 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 METTL26Q96S19 204 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 AUNIPQ9H7T9 357 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 IFT46Q9NQC8 304 aa9.99□□□□□ -0.81
CCDC58-207ENST00000498466 TXNL4BQ9NX01 149 aaKnown RBP9.99□□□□□ -0.81
CCDC58-207ENST00000498466 CD74P04233 296 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 FGF9P31371 208 aaPredicted RBP9.98□□□□□ -0.81
CCDC58-207ENST00000498466 P2RY1P47900 373 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 C1orf134Q5TEV5 83 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 DHRS11Q6UWP2 260 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 DCANP1Q8TF63 244 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 NARS2Q96I59 477 aaKnown RBP9.98□□□□□ -0.81
CCDC58-207ENST00000498466 RAB40CQ96S21 281 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
CCDC58-207ENST00000498466 A0A0A6YYH2 397 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 A6NJ64 397 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 GPR31O00270 319 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 TMEM50AO95807 157 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 RFX2P48378 723 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 EMP1P54849 157 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 NUTF2P61970 127 aaKnown RBP9.97□□□□□ -0.81
CCDC58-207ENST00000498466 PSMG4Q5JS54 123 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms