RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TMEM140Q9NV12 185 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 DPM3Q9P2X0 92 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 PRNDQ9UKY0 176 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 WASHC3Q9Y3C0 194 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV2-70DA0A0C4DH43 119 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 IGSF23A1L1A6 192 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 C15orf61A6NNL5 157 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 OOSP1A8MZH6 123 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 H0YJW9 148 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 UPK2O00526 184 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 FGF16O43320 207 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 CD5LO43866 347 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 KBTBD11O94819 623 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 NXPH3O95157 252 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 IFNA5P01569 189 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 ARG1P05089 322 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 S100A9P06702 114 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 OR9G9P0C7N8 305 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 IAPPP10997 89 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 FOLR2P14207 255 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 USF1P22415 310 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 REG1BP48304 166 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 MEOX2P50222 304 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SULT1A1P50225 295 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 DYNLT3P51808 116 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 DVL1P1P54792 670 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 PAX9P55771 341 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 HSPE1P61604 102 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 RAB11AP62491 216 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 LCN2P80188 198 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 ATP6V1FQ16864 119 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 VMA21Q3ZAQ7 101 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 AARDQ4LEZ3 155 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SPANXN5Q5MJ07 72 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 MINOS1Q5TGZ0 78 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 OR4A47Q6IF82 309 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 CCDC144NLQ6NUI1 221 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 ZNF429Q86V71 674 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 UBAC2Q8NBM4 344 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 BPIFCQ8NFQ6 507 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 OR1S2Q8NGQ3 325 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SAT2Q96F10 170 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 HARBI1Q96MB7 349 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 C12orf57Q99622 126 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 RNF5Q99942 180 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SEC11CQ9BY50 192 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 MRPL20Q9BYC9 149 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SMIM3Q9BZL3 60 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 LPAR2Q9HBW0 351 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 HEYLQ9NQ87 328 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 SIRT7Q9NRC8 400 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 BET1LQ9NYM9 111 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 FBXL17Q9UF56 701 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 ZNF257Q9Y2Q1 563 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 STRAPQ9Y3F4 350 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 OR51B2Q9Y5P1 312 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 MINOS1-NBL1R4GNA1 71 aa4.25□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV1-3A0A0C4DH29 117 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 PCP4L1A6NKN8 68 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 LY6LH3BQJ8 138 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 CST7O76096 145 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 IL6RP08887 468 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 SEC11BP0C7V7 166 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 CD1BP29016 333 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 AKR1D1P51857 326 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 UBE2E1P51965 193 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 F2RL1P55085 397 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 ATP5IP56385 69 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 OR2B8PP59922 312 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 RAB5BP61020 215 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 PAX2Q02962 417 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 CLEC12BQ2HXU8 276 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 RNF212Q495C1 297 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 FAM74A3Q4VXF1 159 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 TPTE2P1Q5T6R2 138 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 RPL7L1Q6DKI1 246 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 SLC25A24Q6NUK1 477 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 ATRAIDQ6UW56 229 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 VMO1Q7Z5L0 202 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 MMD2Q8IY49 270 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 VKORC1L1Q8N0U8 176 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 PUSL1Q8N0Z8 303 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 TEX45Q8NA69 505 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 OR10P1Q8NGE3 313 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 OR4P4Q8NGL7 312 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM167AQ8TBQ9 72 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 SCGB1C1Q8TD33 95 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 PINX1Q96BK5 328 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 GNPNAT1Q96EK6 184 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 QTRT1Q9BXR0 403 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 COMMD5Q9GZQ3 224 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 SIRPDQ9H106 197 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 ARV1Q9H2C2 271 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms