RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 RCC1LQ96I51 464 aaKnown RBP12.34□□□□□ -0.43
SSBP1-214ENST00000498107 GPR61Q9BZJ8 451 aa12.34□□□□□ -0.43
SSBP1-214ENST00000498107 GAR1Q9NY12 217 aaKnown RBP12.34□□□□□ -0.43
SSBP1-214ENST00000498107 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
SSBP1-214ENST00000498107 U3KQ87 197 aa12.34□□□□□ -0.43
SSBP1-214ENST00000498107 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 A0A087WW49 117 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 MFAP2P55001 183 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 UXS1Q8NBZ7 420 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 MISP3Q96FF7 219 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 CIB3Q96Q77 187 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-214ENST00000498107 RBKSQ9H477 322 aa12.33□□□□□ -0.44
SSBP1-214ENST00000498107 NXPH3O95157 252 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 RNASE2P10153 161 aaKnown RBP12.32□□□□□ -0.44
SSBP1-214ENST00000498107 RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 IAH1Q2TAA2 248 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-214ENST00000498107 BSXQ3C1V8 233 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 ZNF502Q8TBZ5 544 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 C21orf62Q9NYP8 219 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
SSBP1-214ENST00000498107 MFSD2BA6NFX1 497 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 WRBO00258 174 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 GGCTO75223 188 aaKnown RBP12.31□□□□□ -0.44
SSBP1-214ENST00000498107 IFNA10P01566 189 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-214ENST00000498107 NKX2-1P43699 371 aaPredicted RBP12.31□□□□□ -0.44
SSBP1-214ENST00000498107 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
SSBP1-214ENST00000498107 C2orf83Q53S99 150 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 PVRIGQ6DKI7 326 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 CLEC19AQ6UXS0 136 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 SCARB1Q8WTV0 552 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 TXN2Q99757 166 aa12.31□□□□□ -0.44
SSBP1-214ENST00000498107 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 I3L2K1 104 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 K7EIM0 57 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 OVOL1O14753 267 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 SYNGR2O43760 224 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 MT-CO2P00403 227 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 CLEC3BP05452 202 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 NPY1RP25929 384 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 ARL3P36405 182 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 SLURP1P55000 103 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 MFAP4P55083 255 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 SPSB3Q6PJ21 355 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 RNASEH2CQ8TDP1 164 aaKnown RBP12.3□□□□□ -0.44
SSBP1-214ENST00000498107 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
SSBP1-214ENST00000498107 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
SSBP1-214ENST00000498107 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 MPTX1A8MV57 137 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 BMPR1BO00238 502 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 TRBV12-3P01733 135 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 IGHV3-23P01764 117 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 FCGR2BP31994 310 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-214ENST00000498107 NPBWR1P48145 328 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 ID3Q02535 119 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 RGS21Q2M5E4 152 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 Q56UQ5 140 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 ETFRF1Q6IPR1 90 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 GSG1LQ6UXU4 331 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 ZBTB8BQ8NAP8 495 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-214ENST00000498107 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-214ENST00000498107 BSCL2Q96G97 398 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-214ENST00000498107 OR10C1Q96KK4 312 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 ELOVL1Q9BW60 279 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 GSKIPQ9P0R6 139 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 S4R3C0 116 aa12.29□□□□□ -0.44
SSBP1-214ENST00000498107 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 GPR183P32249 361 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 OPRK1P41145 380 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 RAB11AP62491 216 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 KLF5Q13887 457 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-214ENST00000498107 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 C1QL4Q86Z23 238 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
SSBP1-214ENST00000498107 ZMAT5Q9UDW3 170 aaKnown RBP12.28□□□□□ -0.44
SSBP1-214ENST00000498107 IGHV3-21A0A0B4J1V1 117 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 PPP5D1E7EU14 171 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 CCSO14618 274 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 TGOLN2O43493 480 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 SCGB1D2O95969 90 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 IFNA4P05014 189 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 IAPPP10997 89 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 SLC25A4P12235 298 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 IGLL1P15814 213 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 SPNP16150 400 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 INSL3P51460 131 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 FAM106AQ4KMX7 169 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 GPHB5Q86YW7 130 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 UBAC2Q8NBM4 344 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 C2orf50Q96LR7 162 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 PEMTQ9UBM1 199 aa12.27□□□□□ -0.45
SSBP1-214ENST00000498107 SEC14L6B5MCN3 397 aa12.26□□□□□ -0.45
SSBP1-214ENST00000498107 NUPL2O15504 423 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms