RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 S4R3C0 116 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 FBN1P35555 2871 aaKnown RBP10.56□□□□□ -0.72
CPNE1-227ENST00000498056 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 CORTO00230 105 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 MPC2O95563 127 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 LY86O95711 162 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 TMEM50AO95807 157 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 IGHV3-11P01762 117 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 RLN2P04090 185 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 IFNA4P05014 189 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 RAP2BP61225 183 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 RAB11AP62491 216 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 C2orf83Q53S99 150 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 NECAP1Q8NC96 275 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 ASB13Q8WXK3 278 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 U3KQ87 197 aa10.56□□□□□ -0.72
CPNE1-227ENST00000498056 TRBV9A0A0B4J1U6 114 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 MFSD2BA6NFX1 497 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 TSC22D2O75157 780 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 NDUFB8O95169 186 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 TAS2R30P59541 319 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 NOXA1Q86UR1 476 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 RNF152Q8N8N0 203 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 THAP6Q8TBB0 222 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 SMIM8Q96KF7 97 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
CPNE1-227ENST00000498056 TSSC4Q9Y5U2 329 aaPredicted RBP10.55□□□□□ -0.72
CPNE1-227ENST00000498056 WNK1Q9H4A3 2382 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 A0A0G2JLM5 398 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 E5RGE8 158 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 H0YIZ8 118 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 SMLR1H3BR10 107 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 CCNKO75909 580 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 BRI3O95415 125 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 MT-CO2P00403 227 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 METTL15P1P0C7V9 234 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 PAX9P55771 341 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 ATP5G2Q06055 141 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 NSUN5P1Q3KNT7 163 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 AKAP14Q86UN6 197 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 ZNF491Q8N8L2 437 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 UBAC2Q8NBM4 344 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 EEF1AKMT3Q96AZ1 226 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 MDFIQ99750 246 aa10.54□□□□□ -0.72
CPNE1-227ENST00000498056 RANGRFQ9HD47 186 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-227ENST00000498056 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-227ENST00000498056 FXYD6-FXYD2A0A087WZ82 144 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 RPS10-NUDT3A0A1W2PQS6 291 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 IGSF23A1L1A6 192 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 FAM24AA6NFZ4 105 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 K7EIM0 57 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 FGL1Q08830 312 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 ACSM6Q6P461 480 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 SLC16A13Q7RTY0 426 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 STX12Q86Y82 276 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
CPNE1-227ENST00000498056 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 CXorf58Q96LI9 332 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 CITED1Q99966 193 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 TENM1Q9UKZ4 2725 aa10.53□□□□□ -0.72
CPNE1-227ENST00000498056 COL6A5A8TX70 2615 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 I3L2K1 104 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 CST7O76096 145 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.73
CPNE1-227ENST00000498056 GPR183P32249 361 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 P2RY1P47900 373 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 Q56UQ5 140 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 TMEM14EPQ6UXP3 125 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 ACOT7LQ6ZUV0 252 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.73
CPNE1-227ENST00000498056 ZC4H2Q9NQZ6 224 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 C21orf62Q9NYP8 219 aa10.52□□□□□ -0.73
CPNE1-227ENST00000498056 SMCO3A2RU48 225 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 CDX1P47902 265 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-227ENST00000498056 ATP5IP56385 69 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-227ENST00000498056 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
CPNE1-227ENST00000498056 CD69Q07108 199 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms