RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 SYNGR2O43760 224 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 IFNA7P01567 189 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 PRB2P02812 416 aaPredicted RBP12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 RUNX1Q01196 453 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 UNQ5815/PRO19632Q6UWF5 114 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 Q6ZRM9 215 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 OR4A5Q8NH83 315 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 ABHD5Q8WTS1 349 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 RHOVQ96L33 236 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 PAIP2BQ9ULR5 123 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-214ENST00000497677 SSSCA1O60232 199 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 TSC22D2O75157 780 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 RBMXL2O75526 392 aaKnown RBP12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 TNFRSF9Q07011 255 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 BAXQ07812 192 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 FHL3Q13643 280 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 PRSS8Q16651 343 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 OR2C3Q8N628 320 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 C11orf1Q9H5F2 150 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 BET1LQ9NYM9 111 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 PRNDQ9UKY0 176 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 DNAH3Q8TD57 4116 aa12.38□□□□□ -0.43
CTDSP1-214ENST00000497677 SAA1P0DJI8 122 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 SPCS3P61009 180 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 GNB1P62873 340 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 IFITM2Q01629 132 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 U3KQ87 197 aa12.37□□□□□ -0.43
CTDSP1-214ENST00000497677 CNIH1O95406 144 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 STX12Q86Y82 276 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 STOML3Q8TAV4 291 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 OR5B12Q96R08 314 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 ZNF257Q9Y2Q1 563 aa12.36□□□□□ -0.43
CTDSP1-214ENST00000497677 MSGN1A6NI15 193 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 C15orf61A6NNL5 157 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 JTBO76095 146 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 IL6RP08887 468 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 CAV2P51636 162 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 KRTAP10-11P60412 298 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 OR1N2Q8NGR9 330 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 TMEM68Q96MH6 324 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 MS4A10Q96PG2 267 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
CTDSP1-214ENST00000497677 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 UPK2O00526 184 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 BRI3O95415 125 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 IFNA17P01571 189 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 NDUFA5Q16718 116 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 REC114Q7Z4M0 266 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 ZNF680Q8NEM1 530 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 ZNF471Q9BX82 626 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 RBKSQ9H477 322 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 AURKAIP1Q9NWT8 199 aaPredicted RBP12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 TNCP24821 2201 aa12.34□□□□□ -0.43
CTDSP1-214ENST00000497677 H3BUA1 57 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 LGALS1P09382 135 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■□□□ 11.9
CTDSP1-214ENST00000497677 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 ZNF266Q14584 549 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 TNXAQ16473 311 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 SSX9Q7RTT3 188 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 OR5B3Q8NH48 314 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 DTD1Q8TEA8 209 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 SRSF12Q8WXF0 261 aaKnown RBP12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 HIPK2Q9H2X6 1198 aa12.33□□□□□ -0.44
CTDSP1-214ENST00000497677 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
CTDSP1-214ENST00000497677 E7EUB6 86 aa12.32□□□□□ -0.44
CTDSP1-214ENST00000497677 DFFBO76075 338 aa12.32□□□□□ -0.44
CTDSP1-214ENST00000497677 KBTBD11O94819 623 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms