RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 HBG2P69892 147 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 C17orf58Q2M2W7 97 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 PET117Q6UWS5 81 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 RNASE6Q93091 150 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 HEATR1Q9H583 2144 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 RAB29O14966 203 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 NUPR1O60356 82 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 PAGE4O60829 102 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 FSTL3O95633 263 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 KIR2DS2P43631 304 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 SERF2P84101 59 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 PYGO2Q9BRQ0 406 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 PSMG3Q9BT73 122 aaPredicted RBP9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 YAE1D1Q9NRH1 226 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 USF3Q68DE3 2245 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 KBTBD11-OT1A0A1B0GTJ5 212 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 GYPAP02724 150 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 ARL3P36405 182 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 PSMB3P49720 205 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 EDDM3AQ14507 147 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 TCF23Q7RTU1 214 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 BOD1L2Q8IYS8 172 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM256Q8N2U0 113 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 FGFRL1Q8N441 504 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 TPRX1Q8N7U7 411 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 FER1L6-AS1Q8NA97 138 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 OR2T10Q8NGZ9 312 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 HRASP01112 189 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 KRASP01116 189 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 MEF2CQ06413 473 aaPredicted RBP9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNRF1Q8ND25 227 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF439Q8NDP4 499 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 OR10G9Q8NGN4 311 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 OR10G7Q8NGN6 311 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 DSCAML1Q8TD84 2053 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM170AQ8WVE7 144 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 DCTN5Q9BTE1 182 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 SPENQ96T58 3664 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 IGHV1-69-2A0A0G2JMI3 117 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 SIVA1O15304 175 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 NPPCP23582 126 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 DUTP33316 252 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 ID1P41134 155 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 TFF3Q07654 80 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 PDLIM3Q53GG5 364 aaPredicted RBP9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 FAM78BQ5VT40 261 aa9.48□□□□□ -0.89
SNRNP200-208ENST00000497539 TRGV10A0A0A0MS01 117 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 TRAV38-1A0A0B4J264 116 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 TRGV8A0A0C4DH27 118 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 C17orf98A8MV24 154 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 E7EQL1 145 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 CTRLP40313 264 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 LINC00205P59089 165 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 DDB2Q92466 427 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 MS4A10Q96PG2 267 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 PRORYQ9H606 182 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 OR51B2Q9Y5P1 312 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 PRR14LQ5THK1 2151 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 APC2O95996 2303 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 ANKRD11Q6UB99 2663 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM178BH3BS89 294 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 COL8A2P25067 703 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 G6PCP35575 357 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 GPR12P47775 334 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 PPOXP50336 477 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 OR4B1Q8NGF8 309 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM204Q9BSN7 226 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 LINC00312Q9Y6C7 94 aa9.47□□□□□ -0.89
SNRNP200-208ENST00000497539 LOC400499M0QZD8 3231 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 FBLL1A6NHQ2 334 aaKnown RBP9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 LINC00473A8K010 186 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 PROP1O75360 226 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 S1PR2O95136 353 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 GPR6P46095 362 aaPredicted RBP9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 ATP5J2P56134 94 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 MRAP2Q96G30 205 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM106BQ9NUM4 274 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 IDI2-AS1Q9NZ38 188 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 GNG12Q9UBI6 72 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.89
SNRNP200-208ENST00000497539 DYSFO75923 2080 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 CD3EP07766 207 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 TMEM14EPQ6UXP3 125 aa9.46□□□□□ -0.9
SNRNP200-208ENST00000497539 TGIF2LYQ8IUE0 185 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms