RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 MTFP1Q9UDX5 166 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 RABL2BQ9UNT1 228 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 KRASP01116 189 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 CTSDP07339 412 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 RPA2P15927 270 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 LPAR6P43657 344 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 MFAP4P55083 255 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 SSBP1Q04837 148 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 TMEM116Q8NCL8 245 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 OR52I2Q8NH67 350 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 FCAMRQ8WWV6 532 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 HINT2Q9BX68 163 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 KMT2AQ03164 3969 aa12.43□□□□□ -0.42
TRAPPC3-207ENST00000497251 H3BMQ9 156 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 GABARAPH6UMI1 98 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 CTDSP2O14595 271 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 CHEK1O14757 476 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 MFAP2P55001 183 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 UBAC2Q8NBM4 344 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 RARRES2Q99969 163 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 GINS3Q9BRX5 216 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 RHPN1-AS1Q9BWJ2 59 aa12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 C11orf68Q9H3H3 251 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-207ENST00000497251 TRAV14DV4A0A0A6YYC5 116 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 DFFBO76075 338 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 IFNA4P05014 189 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 RNASE12Q5GAN4 147 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 RNF2Q99496 336 aa12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 NXF2Q9GZY0 626 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-207ENST00000497251 M0QYG6 137 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 CTDSPLO15194 276 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 CD74P04233 296 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 CD3DP04234 171 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 G6PCP35575 357 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 TAS2R19P59542 299 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-207ENST00000497251 I3L2K1 104 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 YIF1AO95070 293 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 TMEM41BQ5BJD5 291 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 FAM90A2PQ658T7 463 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 FRAS1Q86XX4 4008 aa12.39□□□□□ -0.43
TRAPPC3-207ENST00000497251 NPBWR1P48145 328 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 RND3P61587 244 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 H2BFWTQ7Z2G1 175 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
TRAPPC3-207ENST00000497251 IGHV3-21A0A0B4J1V1 117 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 ZNF207O43670 478 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 GNG7O60262 68 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 RAB3DO95716 219 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 HSPE1P61604 102 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 PRCDQ00LT1 54 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 IL18Q14116 193 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 MEF2DQ14814 521 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 OR11H2Q8NH07 326 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
TRAPPC3-207ENST00000497251 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 INS-IGF2F8WCM5 200 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 PGAM2P15259 253 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 OR4D10Q8NGI6 311 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 ZFAND1Q8TCF1 268 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
TRAPPC3-207ENST00000497251 IGHV3OR16-8A0A075B7F1 116 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 A0A1W2PS18 150 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 CORTO00230 105 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 GSTZ1O43708 216 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 SCGB2A1O75556 95 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 ATG12O94817 140 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 MT-CO2P00403 227 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 TMEM187Q14656 261 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 TCF24Q7RTU0 167 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms