RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CD79AP11912 226 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BOP23527 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BBP33778 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 RPL5P46777 297 aaKnown RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 EIF2B2P49770 351 aaKnown RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BDP58876 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BCP62807 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 RANP62826 216 aaKnown RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 CCL7P80098 99 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 SPA17Q15506 151 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST2H2BEQ16778 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 RPL22L1Q6P5R6 122 aaKnown RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 Q8N2B8 174 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 OR13C4Q8NGS5 318 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 C11orf40Q8WZ69 217 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BHQ93079 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BNQ99877 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 HIST1H2BMQ99879 126 aa1.34□□□□□ -2.19
TARDBP-210ENST00000496840 C11orf68Q9H3H3 251 aaKnown RBP1.34□□□□□ -2.19
TARDBP-210ENST00000496840 SETD5Q9C0A6 1442 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 SMIM9A6NGZ8 99 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 SDCBPO00560 298 aaPredicted RBP1.33□□□□□ -2.2
TARDBP-210ENST00000496840 ANGP03950 147 aaKnown RBP1.33□□□□□ -2.2
TARDBP-210ENST00000496840 METTL15P1P0C7V9 234 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 HSD11B1P28845 292 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 ERVS71-1P61550 626 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 NDUFA5Q16718 116 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 AKIRIN2Q53H80 203 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 ANKRD29Q8N6D5 301 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 PFN4Q8NHR9 129 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 C10orf105Q8TEF2 133 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 PRAP1Q96NZ9 151 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 ADAT1Q9BUB4 502 aaKnown RBP1.33□□□□□ -2.2
TARDBP-210ENST00000496840 PRTFDC1Q9NRG1 225 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 STRCQ7RTU9 1775 aa1.33□□□□□ -2.2
TARDBP-210ENST00000496840 CNIH1O95406 144 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 SHBGP04278 402 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 UBBP0CG47 229 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 DEFA1P59665 94 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 ZNF846Q147U1 533 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 TMED2Q15363 201 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 LPCAT3Q6P1A2 487 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 LCN15Q6UWW0 184 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 TMEM106AQ96A25 262 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 DCUN1D1Q96GG9 259 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 TSPAN32Q96QS1 320 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 ULBP3Q9BZM4 244 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 GLTPQ9NZD2 209 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 ARL2BPQ9Y2Y0 163 aa1.32□□□□□ -2.2
TARDBP-210ENST00000496840 HEATR5BQ9P2D3 2071 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 DOCK5Q9H7D0 1870 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 HECW2Q9P2P5 1572 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 A0A087WUJ7 227 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 OR4C46A6NHA9 309 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 FADS1O60427 444 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 SERPINA1P01009 418 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 TTRP02766 147 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 CAPZBP47756 277 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 RUNX1Q01196 453 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 EDDM3AQ14507 147 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 CDK5R1Q15078 307 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 Q6ZQT0 140 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 S100A7AQ86SG5 101 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 TERB2Q8NHR7 220 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 H1FXQ92522 213 aaKnown RBP1.31□□□□□ -2.2
TARDBP-210ENST00000496840 TOMM6Q96B49 74 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 YIPF3Q9GZM5 350 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 FBXO5Q9UKT4 447 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 PRELID3BQ9Y3B1 194 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 TTC21AQ8NDW8 1320 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 NUP155O75694 1391 aa1.31□□□□□ -2.2
TARDBP-210ENST00000496840 TRAV26-2A0A0B4J265 109 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 IGKV3OR2-268A0A0C4DH90 116 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 FAM236DA0A1B0GTK5 79 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 PQLC2LA1A4F0 135 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 TMEM212A6NML5 194 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 BUB1B-PAK6H3BSN5 160 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 FAM236CP0DP71 79 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 S100A5P33763 92 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 G6PCP35575 357 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 PPP1R2P41236 205 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 CDK10Q15131 360 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 SPANXN3Q5MJ09 141 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 PPP1R2P3Q6NXS1 205 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 BPIFA4PQ86YQ2 179 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 OR6V1Q8N148 313 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 SIGMAR1Q99720 223 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 TRIM4Q9C037 500 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 TLNRD1Q9H1K6 362 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 IL20Q9NYY1 176 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 TMEM56-RWDD3S4R434 201 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 BRWD1Q9NSI6 2320 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 KIF13BQ9NQT8 1826 aa1.3□□□□□ -2.2
TARDBP-210ENST00000496840 MICAL3Q7RTP6 2002 aa1.29□□□□□ -2.2
TARDBP-210ENST00000496840 EXOC1LA0A1B0GW35 172 aa1.29□□□□□ -2.2
TARDBP-210ENST00000496840 DPRXA6NFQ7 191 aa1.29□□□□□ -2.2
TARDBP-210ENST00000496840 CTSDP07339 412 aaPredicted RBP1.29□□□□□ -2.2
TARDBP-210ENST00000496840 TAF1AQ15573 450 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms