RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 C3orf85A0A1B0GTC6 90 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 TAS2R19P59542 299 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 FAAP20Q6NZ36 180 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 GPR141Q7Z602 305 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 OR13C8Q8NGS7 320 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 OR10C1Q96KK4 312 aa10.6□□□□□ -0.71
VTI1A-209ENST00000496445 NXF2Q9GZY0 626 aaKnown RBP10.6□□□□□ -0.71
VTI1A-209ENST00000496445 A0A0G2JRQ6 117 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 GABARAPH6UMI1 98 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 CTDSP2O14595 271 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 NUPL2O15504 423 aaKnown RBP10.59□□□□□ -0.71
VTI1A-209ENST00000496445 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 RAB3DO95716 219 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 CTSDP07339 412 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-209ENST00000496445 AKR1C2P52895 323 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 MFAP4P55083 255 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 RELQ04864 619 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-209ENST00000496445 SP6Q3SY56 376 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 SCGB2B2Q4G0G5 96 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 TERB2Q8NHR7 220 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 MARCH1Q8TCQ1 289 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
VTI1A-209ENST00000496445 RNF2Q99496 336 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 TXN2Q99757 166 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 COPZ2Q9P299 210 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 FRAS1Q86XX4 4008 aa10.59□□□□□ -0.71
VTI1A-209ENST00000496445 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 CHEK1O14757 476 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 RGS5O15539 181 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 UCP1P25874 307 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 ERHP84090 104 aaKnown RBP10.58□□□□□ -0.72
VTI1A-209ENST00000496445 SSBP1Q04837 148 aaKnown RBP10.58□□□□□ -0.72
VTI1A-209ENST00000496445 TRIM16LQ309B1 348 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 CCDC71LQ8N9Z2 235 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 TMEM116Q8NCL8 245 aa10.58□□□□□ -0.72
VTI1A-209ENST00000496445 OR4C46A6NHA9 309 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 GNG7O60262 68 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 YIF1AO95070 293 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
VTI1A-209ENST00000496445 Q6ZRM9 215 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-209ENST00000496445 IL17DQ8TAD2 202 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 LHFPL5Q8TAF8 219 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 ZFAND1Q8TCF1 268 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 SMIM4Q8WVI0 70 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 RTBDNQ9BSG5 229 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-209ENST00000496445 RHPN1-AS1Q9BWJ2 59 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
VTI1A-209ENST00000496445 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 OR5AC1P0C628 307 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 ETV6P41212 452 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-209ENST00000496445 APOC4P55056 127 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 MRPS10P82664 201 aaKnown RBP10.56□□□□□ -0.72
VTI1A-209ENST00000496445 ZNF124Q15973 351 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 OR4C16Q8NGL9 310 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
VTI1A-209ENST00000496445 CCDC59Q9P031 241 aaKnown RBP10.56□□□□□ -0.72
VTI1A-209ENST00000496445 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
VTI1A-209ENST00000496445 TRAV14DV4A0A0A6YYC5 116 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 ATG12O94817 140 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 CDS2O95674 445 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 IFNA17P01571 189 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 APOHP02749 345 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-209ENST00000496445 SNCAP37840 140 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
VTI1A-209ENST00000496445 MEF2DQ14814 521 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 BSXQ3C1V8 233 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 GLYATL2Q8WU03 294 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 ST8SIA2Q92186 375 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-209ENST00000496445 NAA60Q9H7X0 242 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
VTI1A-209ENST00000496445 DNAH10Q8IVF4 4471 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 A0A1B0GU03 582 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 CTDSPLO15194 276 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 B3GALNT1O75752 331 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
VTI1A-209ENST00000496445 NPBWR1P48145 328 aa10.54□□□□□ -0.72
VTI1A-209ENST00000496445 TFPI2P48307 235 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms