RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TYMSP04818 313 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 SOD3P08294 240 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 OR5G3P0C626 314 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 PRRX1P54821 245 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 C11orf52Q96A22 123 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 RNF2Q99496 336 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 MRPL32Q9BYC8 188 aaKnown RBP8.96□□□□□ -0.97
CMSS1-208ENST00000496116 ZNF430Q9H8G1 570 aaPredicted RBP8.96□□□□□ -0.97
CMSS1-208ENST00000496116 AURKAIP1Q9NWT8 199 aaPredicted RBP8.96□□□□□ -0.97
CMSS1-208ENST00000496116 DMXL2Q8TDJ6 3036 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 C9JCJ5 164 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 OR7C2O60412 319 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 FSTL3O95633 263 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 C1QTNF9P0C862 333 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 FOXL1Q12952 345 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 CLEC12BQ2HXU8 276 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 ACY3Q96HD9 319 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 GPR61Q9BZJ8 451 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 MIOXQ9UGB7 285 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 LY96Q9Y6Y9 160 aa8.96□□□□□ -0.98
CMSS1-208ENST00000496116 PGPEP1LA6NFU8 196 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 E7EUB6 86 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 CCL21O00585 134 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 ENSAO43768 121 aaKnown RBP8.95□□□□□ -0.98
CMSS1-208ENST00000496116 SLC25A17O43808 307 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 PLAUP00749 431 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 GATA2P23769 480 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-208ENST00000496116 PPOXP50336 477 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 WT1-ASQ06250 92 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 MLANAQ16655 118 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 GFI1BQ5VTD9 330 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 TMEM183AQ8IXX5 376 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 C11orf42Q8N5U0 333 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 ZNF114Q8NC26 417 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
CMSS1-208ENST00000496116 PTPRQQ9UMZ3 2332 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 IGHV2-26A0A0B4J1V2 119 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 C8orf88P0DMB2 117 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 KLRB1Q12918 225 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 ACTL10Q5JWF8 245 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 TEX45Q8NA69 505 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 OR10G8Q8NGN5 311 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 OR2T6Q8NHC8 308 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 OCC1Q8TAD7 63 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 PFDN5Q99471 154 aa8.95□□□□□ -0.98
CMSS1-208ENST00000496116 FABP4P15090 132 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 ZNF672Q499Z4 452 aaPredicted RBP8.94□□□□□ -0.98
CMSS1-208ENST00000496116 PYY3Q5JQD4 70 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 ETFRF1Q6IPR1 90 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 TEX38Q6PEX7 206 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 MMD2Q8IY49 270 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 OR1L4Q8NGR5 311 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 SGMS2Q8NHU3 365 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 SLC25A33Q9BSK2 321 aa8.94□□□□□ -0.98
CMSS1-208ENST00000496116 A0A0U1RQK1 487 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 ZNF320A2RRD8 509 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 HELTA6NFD8 242 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 CGB1A6NKQ9 187 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 RBP4P02753 201 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 COL8A2P25067 703 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 BPIFB3P59826 476 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 SELENOTP62341 195 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 TMEM37Q8WXS4 190 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 CLEC7AQ9BXN2 247 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 COL25A1Q9BXS0 654 aaPredicted RBP8.93□□□□□ -0.98
CMSS1-208ENST00000496116 DNAJC4Q9NNZ3 241 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 INSIG2Q9Y5U4 225 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 PPIAL4CA0A0B4J2A2 164 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 A0A1W2PPI3 338 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 TCRBV4S1A1TA0A5B7 111 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 IGLV1-47P01700 117 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 IGHV2-70P01814 119 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 PPIAL4GP0DN37 164 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 HNF1AP20823 631 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 ZNF841Q6ZN19 808 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 BEND2Q8NDZ0 799 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 OR1P1Q8NH06 330 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 ZNF503Q96F45 646 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 EAF1Q96JC9 268 aaPredicted RBP8.93□□□□□ -0.98
CMSS1-208ENST00000496116 PACRGQ96M98 296 aaPredicted RBP8.93□□□□□ -0.98
CMSS1-208ENST00000496116 AMMECR1Q9Y4X0 333 aaPredicted RBP8.93□□□□□ -0.98
CMSS1-208ENST00000496116 DCHS1Q96JQ0 3298 aa8.93□□□□□ -0.98
CMSS1-208ENST00000496116 TRAV9-1A0A075B6T8 112 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 IGHV3-72A0A0B4J1Y9 119 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 LYNX1G3V0Z9 82 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 BUB1B-PAK6H3BSN5 160 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 COX7A2P2O60397 106 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 OR10J4P0C629 311 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 LYNX1P0DP58 116 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 GNG4P50150 75 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 SSX2Q16385 188 aa8.92□□□□□ -0.98
CMSS1-208ENST00000496116 COA6Q5JTJ3 125 aaKnown RBP8.92□□□□□ -0.98
CMSS1-208ENST00000496116 OR8B3Q8NGG8 313 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms