RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 IGKV1-5P01602 117 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 NPBWR1P48145 328 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 AKR1C2P52895 323 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPRF-214ENST00000496043 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 SP6Q3SY56 376 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 SLC35G3Q8N808 338 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 TMEM116Q8NCL8 245 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 DUSP18Q8NEJ0 188 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 OR4D10Q8NGI6 311 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 PINX1Q96BK5 328 aaKnown RBP9.5□□□□□ -0.89
PTPRF-214ENST00000496043 RRNAD1Q96FB5 475 aaKnown RBP9.5□□□□□ -0.89
PTPRF-214ENST00000496043 PDCD10Q9BUL8 212 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 NXF2Q9GZY0 626 aaKnown RBP9.5□□□□□ -0.89
PTPRF-214ENST00000496043 UBQLN2Q9UHD9 624 aa9.5□□□□□ -0.89
PTPRF-214ENST00000496043 TRAV14DV4A0A0A6YYC5 116 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 IGHV7-4-1A0A0J9YVY3 117 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 DISC1C4P0D8 188 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 ST8SIA3O43173 380 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 IGHV3-48P01763 117 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 CTSDP07339 412 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-214ENST00000496043 P0C879 139 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 PPP5CP53041 499 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 APOC4P55056 127 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 CMC4P56277 68 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-214ENST00000496043 MEF2DQ14814 521 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 SPCS2Q15005 226 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 SPINK9Q5DT21 86 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 OR13C8Q8NGS7 320 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 MARCH1Q8TCQ1 289 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 OVOL2Q9BRP0 275 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 RHPN1-AS1Q9BWJ2 59 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 ENY2Q9NPA8 101 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 RABL2AQ9UBK7 228 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-214ENST00000496043 RABL2BQ9UNT1 228 aa9.49□□□□□ -0.89
PTPRF-214ENST00000496043 UBE2CO00762 179 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 CHEK1O14757 476 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 UCP1P25874 307 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 ETV6P41212 452 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-214ENST00000496043 RNASE11Q8TAA1 199 aaKnown RBP9.48□□□□□ -0.89
PTPRF-214ENST00000496043 DIRAS2Q96HU8 199 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 RNF2Q99496 336 aa9.48□□□□□ -0.89
PTPRF-214ENST00000496043 C14orf166Q9Y224 244 aaKnown RBP9.48□□□□□ -0.89
PTPRF-214ENST00000496043 TEX13DA0A0J9YY54 714 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-214ENST00000496043 CORTO00230 105 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 CTDSPLO15194 276 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 CDS2O95674 445 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 TMEM50AO95807 157 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 TMBIM6P55061 237 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 DHODHQ02127 395 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 IL18Q14116 193 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-214ENST00000496043 FAM219AQ8IW50 185 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 STPG3Q8N7X2 389 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 RAB2BQ8WUD1 216 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 BCL7BQ9BQE9 202 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 GINS3Q9BRX5 216 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 RTBDNQ9BSG5 229 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-214ENST00000496043 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-214ENST00000496043 TENM2Q9NT68 2774 aa9.47□□□□□ -0.89
PTPRF-214ENST00000496043 IGHV3-49A0A0A0MS15 119 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 SPRY2O43597 315 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 CD5P06127 495 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 AKAIN1P0CW23 69 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.9
PTPRF-214ENST00000496043 BMI1P35226 326 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 HOXA1P49639 335 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-214ENST00000496043 PAFAH1B2P68402 229 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 ODF3L2Q3SX64 289 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 TOMM20LQ6UXN7 152 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 Q6ZWC4 215 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 GLYATL2Q8WU03 294 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 SMIM4Q8WVI0 70 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 GALNT14Q96FL9 552 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 ZNF414Q96IQ9 312 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 C6orf62Q9GZU0 229 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-214ENST00000496043 TMEM222Q9H0R3 208 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 GPR132Q9UNW8 380 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
PTPRF-214ENST00000496043 DYNC2H1Q8NCM8 4307 aaKnown RBP9.46□□□□□ -0.9
PTPRF-214ENST00000496043 A0A0G2JRQ6 117 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 OR5AC1P0C628 307 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 RPL5P46777 297 aaKnown RBP9.45□□□□□ -0.9
PTPRF-214ENST00000496043 TFPI2P48307 235 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 SPCS3P61009 180 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 FAAP20Q6NZ36 180 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 Q6ZRM9 215 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 WFDC3Q8IUB2 231 aa9.45□□□□□ -0.9
PTPRF-214ENST00000496043 SELENOHQ8IZQ5 122 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms