RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 RBMY1EA6NEQ0 496 aaKnown RBP18.15■□□□□ 0.5
HLA-C-209ENST00000495835 TSPAN4O14817 238 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 NUPL2O15504 423 aaKnown RBP18.15■□□□□ 0.5
HLA-C-209ENST00000495835 RBMY1DP0C7P1 496 aaKnown RBP18.15■□□□□ 0.5
HLA-C-209ENST00000495835 AKAIN1P0CW23 69 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 IL18Q14116 193 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 FAM219AQ8IW50 185 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 RRNAD1Q96FB5 475 aaKnown RBP18.15■□□□□ 0.5
HLA-C-209ENST00000495835 MISP3Q96FF7 219 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 PDCD10Q9BUL8 212 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 C14orf166Q9Y224 244 aaKnown RBP18.15■□□□□ 0.5
HLA-C-209ENST00000495835 NOL3O60936 208 aaKnown RBP18.14■□□□□ 0.49
HLA-C-209ENST00000495835 SCAF4O95104 1147 aaKnown RBP18.14■□□□□ 0.49
HLA-C-209ENST00000495835 SNCAP37840 140 aa18.14■□□□□ 0.49
HLA-C-209ENST00000495835 TRIM16LQ309B1 348 aa18.14■□□□□ 0.49
HLA-C-209ENST00000495835 RSL24D1Q9UHA3 163 aaKnown RBP18.14■□□□□ 0.49
HLA-C-209ENST00000495835 GSTZ1O43708 216 aaPredicted RBP18.13■□□□□ 0.49
HLA-C-209ENST00000495835 CDS2O95674 445 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 MT-CO2P00403 227 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 IFNA17P01571 189 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 SUB1P53999 127 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-C-209ENST00000495835 SLC35G3Q8N808 338 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 PRRT1Q99946 306 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 TMEM222Q9H0R3 208 aa18.13■□□□□ 0.49
HLA-C-209ENST00000495835 CORTO00230 105 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 DHODHQ02127 395 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 SP6Q3SY56 376 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 PVRIGQ6DKI7 326 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 OR10C1Q96KK4 312 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 RTBDNQ9BSG5 229 aaPredicted RBP18.12■□□□□ 0.49
HLA-C-209ENST00000495835 C20orf24Q9BUV8 137 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 NXF2Q9GZY0 626 aaKnown RBP18.12■□□□□ 0.49
HLA-C-209ENST00000495835 WFDC10AQ9H1F0 79 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 GPR132Q9UNW8 380 aa18.12■□□□□ 0.49
HLA-C-209ENST00000495835 ST8SIA3O43173 380 aa18.11■□□□□ 0.49
HLA-C-209ENST00000495835 IZUMO4Q1ZYL8 232 aa18.11■□□□□ 0.49
HLA-C-209ENST00000495835 AARDQ4LEZ3 155 aa18.11■□□□□ 0.49
HLA-C-209ENST00000495835 GLYATL2Q8WU03 294 aa18.11■□□□□ 0.49
HLA-C-209ENST00000495835 FAM110AQ9BQ89 295 aa18.11■□□□□ 0.49
HLA-C-209ENST00000495835 SLIRPQ9GZT3 109 aaKnown RBP18.11■□□□□ 0.49
HLA-C-209ENST00000495835 TEX13DA0A0J9YY54 714 aaPredicted RBP18.1■□□□□ 0.49
HLA-C-209ENST00000495835 ANKRD20A5PA0PJZ0 165 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 H3BMQ9 156 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 GNG7O60262 68 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 NPBWR1P48145 328 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 DUSP18Q8NEJ0 188 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 OR4C16Q8NGL9 310 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 C6orf62Q9GZU0 229 aaPredicted RBP18.1■□□□□ 0.49
HLA-C-209ENST00000495835 NAA60Q9H7X0 242 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 SMPXQ9UHP9 88 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 SELENOKQ9Y6D0 94 aa18.1■□□□□ 0.49
HLA-C-209ENST00000495835 LOC102724200A0A096LPH7 203 aaPredicted RBP18.09■□□□□ 0.49
HLA-C-209ENST00000495835 OR52E5Q8NH55 327 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 RNASE11Q8TAA1 199 aaKnown RBP18.09■□□□□ 0.49
HLA-C-209ENST00000495835 IL17DQ8TAD2 202 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 RBPMSQ93062 196 aaKnown RBP18.09■□□□□ 0.49
HLA-C-209ENST00000495835 PINX1Q96BK5 328 aaKnown RBP18.09■□□□□ 0.49
HLA-C-209ENST00000495835 SCGB3A2Q96PL1 93 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 SOSTQ9BQB4 213 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 GGTLC1Q9BX51 225 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 ENY2Q9NPA8 101 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.09■□□□□ 0.49
HLA-C-209ENST00000495835 CACFD1Q9UGQ2 172 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 SCP2D1Q9UJQ7 156 aa18.09■□□□□ 0.49
HLA-C-209ENST00000495835 CSMD3Q7Z407 3707 aa18.08■□□□□ 0.49
HLA-C-209ENST00000495835 OR4C46A6NHA9 309 aa18.08■□□□□ 0.48
HLA-C-209ENST00000495835 CD5P06127 495 aa18.08■□□□□ 0.48
HLA-C-209ENST00000495835 OR5AC1P0C628 307 aa18.08■□□□□ 0.48
HLA-C-209ENST00000495835 FAAP20Q6NZ36 180 aa18.08■□□□□ 0.48
HLA-C-209ENST00000495835 ZNF414Q96IQ9 312 aa18.08■□□□□ 0.48
HLA-C-209ENST00000495835 IGHV7-4-1A0A0J9YVY3 117 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 CRYM-AS1A6NIL9 109 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 TNFSF8P32971 234 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 SPCS3P61009 180 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 GINS3Q9BRX5 216 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 KCNIP3Q9Y2W7 256 aa18.07■□□□□ 0.48
HLA-C-209ENST00000495835 TRAV14DV4A0A0A6YYC5 116 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 A0A0G2JRQ6 117 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 FABP12A6NFH5 140 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 YIF1AO95070 293 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 RNASE2P10153 161 aaKnown RBP18.06■□□□□ 0.48
HLA-C-209ENST00000495835 BMI1P35226 326 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 ETV6P41212 452 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 HOXA1P49639 335 aaPredicted RBP18.06■□□□□ 0.48
HLA-C-209ENST00000495835 CMC4P56277 68 aaPredicted RBP18.06■□□□□ 0.48
HLA-C-209ENST00000495835 BSXQ3C1V8 233 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 SPINK9Q5DT21 86 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 TMEM116Q8NCL8 245 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 OR51S1Q8NGJ8 323 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 TMEM56-RWDD3S4R434 201 aa18.06■□□□□ 0.48
HLA-C-209ENST00000495835 DYNC2H1Q8NCM8 4307 aaKnown RBP18.05■□□□□ 0.48
HLA-C-209ENST00000495835 CHEK1O14757 476 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 Q6ZRM9 215 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 SELENOHQ8IZQ5 122 aaKnown RBP18.05■□□□□ 0.48
HLA-C-209ENST00000495835 MCFD2Q8NI22 146 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 IL22RA2Q969J5 263 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 GALNT14Q96FL9 552 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 RHPN1-AS1Q9BWJ2 59 aa18.05■□□□□ 0.48
HLA-C-209ENST00000495835 STARD9Q9P2P6 4700 aa18.04■□□□□ 0.48
HLA-C-209ENST00000495835 TMEM50AO95807 157 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms