RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 TOMM20LQ6UXN7 152 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 CMTM1Q8IZ96 169 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 TSPAN14Q8NG11 270 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 BORCS5Q969J3 196 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 PINX1Q96BK5 328 aaKnown RBP8.78□□□□□ -1
SHROOM1-206ENST00000495680 SEC22AQ96IW7 307 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 DNAH2Q9P225 4427 aa8.78□□□□□ -1
SHROOM1-206ENST00000495680 DFFBO76075 338 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 GIG44P09565 113 aaPredicted RBP8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 TAS2R46P59540 309 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 PRCDQ00LT1 54 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 TMEM69Q5SWH9 247 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 TBC1D26Q86UD7 250 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 SAMD12Q8N8I0 201 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 ZNF114Q8NC26 417 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 OR6F1Q8NGZ6 308 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 MRGPRFQ96AM1 343 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 S100A16Q96FQ6 103 aaKnown RBP8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 MFFQ9GZY8 342 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 MS4A6AQ9H2W1 248 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 FKBP11Q9NYL4 201 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 MRPL36Q9P0J6 103 aaKnown RBP8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 APLNQ9ULZ1 77 aa8.77□□□□□ -1.01
SHROOM1-206ENST00000495680 A0A1B0GU03 582 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 ST8SIA3O43173 380 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 GNG7O60262 68 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 IFNA4P05014 189 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 RPS19P39019 145 aaKnown RBP8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 TMEM187Q14656 261 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 UBE2NLQ5JXB2 153 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 Q8NAQ8 132 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 CMTM3Q96MX0 182 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 TXN2Q99757 166 aa8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 PUS1Q9Y606 427 aaKnown RBP eCLIP8.76□□□□□ -1.01
SHROOM1-206ENST00000495680 IGLL5B9A064 214 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 ATP6V1G2O95670 118 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 EIF4EP06730 217 aaKnown RBP8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 C4BPBP20851 252 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 HSPE1P61604 102 aaKnown RBP8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 LSM3P62310 102 aaKnown RBP8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 H2BFWTQ7Z2G1 175 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 TSC22D3Q99576 134 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 YTHDF1Q9BYJ9 559 aaKnown RBP8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
SHROOM1-206ENST00000495680 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 KNCNA6PVL3 124 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 DNASE2O00115 360 aaPredicted RBP8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 IGKV1-5P01602 117 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 PRSS3P35030 304 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 MLANAQ16655 118 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 GPX8Q8TED1 209 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 GINS3Q9BRX5 216 aa8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
SHROOM1-206ENST00000495680 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 TMEM50AO95807 157 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 PI3P19957 117 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 PPP5CP53041 499 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 TSPAN5P62079 268 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 PAFAH1B2P68402 229 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 ZNF600Q6ZNG1 722 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 Q6ZTC4 211 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 FAM212BQ9NTI7 297 aaPredicted RBP8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 RABAC1Q9UI14 185 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 PKHD1P08F94 4074 aa8.73□□□□□ -1.01
SHROOM1-206ENST00000495680 A0A0B4J293 547 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 K7EQG2 157 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 M0QYG6 137 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 TMEM127O75204 238 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 ZNF688P0C7X2 276 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 P0C879 139 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 RNASE2P10153 161 aaKnown RBP8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 ERHP84090 104 aaKnown RBP8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 ZNF767PQ75MW2 155 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 SNX29P2Q8IUI4 249 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 CROCCP3Q8IVE0 287 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 STHQ8IWL8 128 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 DUSP18Q8NEJ0 188 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 STXBP6Q8NFX7 210 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 YIPF6Q96EC8 236 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 Q9H521 79 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 FNDC4Q9H6D8 234 aaPredicted RBP8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 X6R8D5 127 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 DNAH11Q96DT5 4516 aa8.72□□□□□ -1.01
SHROOM1-206ENST00000495680 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.02
SHROOM1-206ENST00000495680 A0A0G2JRQ6 117 aa8.71□□□□□ -1.02
SHROOM1-206ENST00000495680 ETV6P41212 452 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms