RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GNG2P59768 71 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 ERVK-16P61578 105 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 UBE2UQ5VVX9 321 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 ZNF818PQ6ZRF7 136 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 ZNF114Q8NC26 417 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 BORCS5Q969J3 196 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 SLC25A46Q96AG3 418 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 NEU1Q99519 415 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
COL1A1-209ENST00000495677 A0A1W2PS18 150 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 GNG7O60262 68 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 SNAPC5O75971 98 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 ATP6V1G2O95670 118 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 F2RP25116 425 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
COL1A1-209ENST00000495677 IZUMO2Q6UXV1 221 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 UBE2DNLQ8IWF7 75 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 HINT2Q9BX68 163 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 TPRKBQ9Y3C4 175 aa9.6□□□□□ -0.87
COL1A1-209ENST00000495677 MT-CO2P00403 227 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 MYL9P24844 172 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 GNRHRP30968 328 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
COL1A1-209ENST00000495677 KCTD21Q4G0X4 260 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 ZNF367Q7RTV3 350 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 HOGA1Q86XE5 327 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 TSC22D3Q99576 134 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 CLEC5AQ9NY25 188 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 RABAC1Q9UI14 185 aa9.59□□□□□ -0.87
COL1A1-209ENST00000495677 RRP15Q9Y3B9 282 aaKnown RBP9.59□□□□□ -0.87
COL1A1-209ENST00000495677 TRDV1A0A1B0GX56 115 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 TMEM189A5PLL7 270 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 NPPCP23582 126 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 NPBWR1P48145 328 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
COL1A1-209ENST00000495677 AADACL3Q5VUY0 350 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 TPRA1Q86W33 373 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 FCAMRQ8WWV6 532 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 RNF167Q9H6Y7 350 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 NSG2Q9Y328 171 aa9.58□□□□□ -0.88
COL1A1-209ENST00000495677 PUS1Q9Y606 427 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL1A1-209ENST00000495677 HERC1Q15751 4861 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 RGS10O43665 173 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 TMEM50AO95807 157 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 KRASP01116 189 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 PTHLHP12272 177 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 CRYBB3P26998 211 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 FGF9P31371 208 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-209ENST00000495677 TNP2Q05952 138 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-209ENST00000495677 PRSS48Q7RTY5 328 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 SEPSECSQ9HD40 501 aaKnown RBP9.57□□□□□ -0.88
COL1A1-209ENST00000495677 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
COL1A1-209ENST00000495677 FAM212BQ9NTI7 297 aaPredicted RBP9.57□□□□□ -0.88
COL1A1-209ENST00000495677 IGHV3-66A0A0C4DH42 116 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 TEX48A0A1B0GUV7 120 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 NOTOA8MTQ0 251 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 PGLYRP1O75594 196 aaPredicted RBP9.56□□□□□ -0.88
COL1A1-209ENST00000495677 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 G6PCP35575 357 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 LPAR6P43657 344 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 FXYD4P59646 89 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 OXA1LQ15070 435 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 DHRS11Q6UWP2 260 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 STXBP6Q8NFX7 210 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 OR5AP2Q8NGF4 316 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 CNBD2Q96M20 576 aa9.56□□□□□ -0.88
COL1A1-209ENST00000495677 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
COL1A1-209ENST00000495677 A0A1B0GU03 582 aa9.55□□□□□ -0.88
COL1A1-209ENST00000495677 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
COL1A1-209ENST00000495677 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
COL1A1-209ENST00000495677 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
COL1A1-209ENST00000495677 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
COL1A1-209ENST00000495677 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
COL1A1-209ENST00000495677 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
COL1A1-209ENST00000495677 MOB3AQ96BX8 217 aa9.55□□□□□ -0.88
COL1A1-209ENST00000495677 NDUFB11Q9NX14 153 aa9.55□□□□□ -0.88
COL1A1-209ENST00000495677 A0A0A6YYH2 397 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 A6NJ64 397 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 P2RY1P47900 373 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 HSPA13P48723 471 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 AP2S1P53680 142 aaPredicted RBP9.54□□□□□ -0.88
COL1A1-209ENST00000495677 SCAND1P57086 179 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 TMEM17Q86X19 198 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 PINX1Q96BK5 328 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms