RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 IGHV3-21A0A0B4J1V1 117 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 MFSD2BA6NFX1 497 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 SEC14L6B5MCN3 397 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 PPP5D1E7EU14 171 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 MED6O75586 246 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 CLEC3BP05452 202 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 ARL3P36405 182 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 C9orf66Q5T8R8 295 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 NRARPQ7Z6K4 114 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 NOXA1Q86UR1 476 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 C1QL4Q86Z23 238 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 UBAC2Q8NBM4 344 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 DUSP18Q8NEJ0 188 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 DTD1Q8TEA8 209 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 ZNF431Q8TF32 576 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 ELOVL1Q9BW60 279 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 GAR1Q9NY12 217 aaKnown RBP9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 HSPB7Q9UBY9 170 aa9.3□□□□□ -0.92
CSNK1E-213ENST00000495232 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 ADAP1O75689 374 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 IFNA10P01566 189 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 GPR183P32249 361 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 MFAP2P55001 183 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 SYNJ2BPP57105 145 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 Q56UQ5 140 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 SAMD5Q5TGI4 173 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 SLC24A4Q8NFF2 622 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 ZNF502Q8TBZ5 544 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 SCARB1Q8WTV0 552 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 CCDC140Q96MF4 163 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 SEC22CQ9BRL7 303 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 RBKSQ9H477 322 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 ZMAT5Q9UDW3 170 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-213ENST00000495232 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 INMT-MINDY4F8WBC2 141 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 K7EIM0 57 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 BMPR1BO00238 502 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 PITX3O75364 302 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 SAP30O75446 220 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 MT-CO2P00403 227 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 IL5P05113 134 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 RNASE2P10153 161 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 OPRK1P41145 380 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 INSL3P51460 131 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 MFAP4P55083 255 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 KLF5Q13887 457 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 FAM106AQ4KMX7 169 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 C12orf45Q8N5I9 185 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 BSCL2Q96G97 398 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 OR4C12Q96R67 309 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 ATP6V0BQ99437 205 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 ZC4H2Q9NQZ6 224 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 PEMTQ9UBM1 199 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 U3KQ87 197 aa9.28□□□□□ -0.92
CSNK1E-213ENST00000495232 RPS10-NUDT3A0A1W2PQS6 291 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 FAM25EA8MYX2 175 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 I3L2K1 104 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 WRBO00258 174 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 TGOLN2O43493 480 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 PRAF2O60831 178 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 SCGB2A1O75556 95 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 OR2C1O95371 312 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 NPY1RP25929 384 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 RPP30P78346 268 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 IAH1Q2TAA2 248 aaPredicted RBP9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 ACSM6Q6P461 480 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 OR9G4Q8NGQ1 327 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 CIB3Q96Q77 187 aaPredicted RBP9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 TXN2Q99757 166 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 GSKIPQ9P0R6 139 aa9.27□□□□□ -0.93
CSNK1E-213ENST00000495232 ZNF320A2RRD8 509 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 C5orf51A6NDU8 294 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 MPTX1A8MV57 137 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 NUPL2O15504 423 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 SYNGR2O43760 224 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 GNG7O60262 68 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 LY86O95711 162 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 SCGB1D2O95969 90 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 IFNA4P05014 189 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 IAPPP10997 89 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 NPBWR1P48145 328 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 ATP5IP56385 69 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 RAB11AP62491 216 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 BEAN1Q3B7T3 259 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 BSXQ3C1V8 233 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 GPHB5Q86YW7 130 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 MARVELD1Q9BSK0 173 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 MAGT1Q9H0U3 335 aa9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 PAIP2BQ9ULR5 123 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-213ENST00000495232 NOTCH3Q9UM47 2321 aa9.25□□□□□ -0.93
CSNK1E-213ENST00000495232 SNRPGP15A8MWD9 76 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms