RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
SDF4-207ENST00000494748 A0A1W2PRE2 83 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 IGKV3-15P01624 115 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 KIR2DS2P43631 304 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 RAB31Q13636 194 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 PMCHL1Q16048 86 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 COMMD5Q9GZQ3 224 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 TNFRSF19Q9NS68 423 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 DUSP13Q9UII6 198 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 CEACAM8P31997 349 aaPredicted RBP12.53□□□□□ -0.4
SDF4-207ENST00000494748 CDKN1BP46527 198 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 RASL11AQ6T310 242 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 SLC25A2Q9BXI2 301 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 C7orf69Q9H7B7 122 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 SIT1Q9Y3P8 196 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 IGHV1-69-2A0A0G2JMI3 117 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
SDF4-207ENST00000494748 C9orf172C9J069 976 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 AGFG2O95081 481 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
SDF4-207ENST00000494748 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 DEFB127Q9H1M4 99 aa12.53□□□□□ -0.4
SDF4-207ENST00000494748 ZFHX4Q86UP3 3567 aa12.52□□□□□ -0.4
SDF4-207ENST00000494748 ITGB1BP1O14713 200 aa12.52□□□□□ -0.4
SDF4-207ENST00000494748 SAA2P0DJI9 122 aaPredicted RBP12.52□□□□□ -0.4
SDF4-207ENST00000494748 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.4
SDF4-207ENST00000494748 MLANAQ16655 118 aa12.52□□□□□ -0.4
SDF4-207ENST00000494748 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.4
SDF4-207ENST00000494748 SLC25A33Q9BSK2 321 aa12.52□□□□□ -0.4
SDF4-207ENST00000494748 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.4
SDF4-207ENST00000494748 C17orf58Q2M2W7 97 aa12.52□□□□□ -0.41
SDF4-207ENST00000494748 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.41
SDF4-207ENST00000494748 NUP35Q8NFH5 326 aa12.52□□□□□ -0.41
SDF4-207ENST00000494748 DYSFO75923 2080 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 OR7C2O60412 319 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 OR2J3O76001 311 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 POU2AF1Q16633 256 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 TUBG2Q9NRH3 451 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 OR9G1Q8NH87 305 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 TRAV5A0A0B4J249 113 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 ZNF841Q6ZN19 808 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 CORO2AQ92828 525 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 SERTAD4Q9NUC0 356 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
SDF4-207ENST00000494748 A0A1W2PN81 502 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 SRRM5B3KS81 715 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 RPL8P62917 257 aaKnown RBP12.5□□□□□ -0.41
SDF4-207ENST00000494748 GUSBP1Q15486 140 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 Q56UQ5 140 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 SNRNP40Q96DI7 357 aaKnown RBP12.5□□□□□ -0.41
SDF4-207ENST00000494748 ZNF355PQ9NSJ1 428 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 A0A1B0GXF2 115 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
SDF4-207ENST00000494748 GPR6P46095 362 aaPredicted RBP12.5□□□□□ -0.41
SDF4-207ENST00000494748 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 FBLN7Q53RD9 439 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 ZNRF1Q8ND25 227 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 CALYQ9NYX4 217 aa12.5□□□□□ -0.41
SDF4-207ENST00000494748 MGST3O14880 152 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 UBE2G1P62253 170 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 MSMPQ1L6U9 139 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
SDF4-207ENST00000494748 IGHV3OR15-7A0A075B7D8 119 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 FSTL3O95633 263 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 ACP1P24666 158 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 SSBP4Q9BWG4 385 aaPredicted RBP12.49□□□□□ -0.41
SDF4-207ENST00000494748 GCM1Q9NP62 436 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
SDF4-207ENST00000494748 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
SDF4-207ENST00000494748 FABP6P51161 128 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 MFAP2P55001 183 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
SDF4-207ENST00000494748 M0R2Z0 102 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 CECR9P0C854 216 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 TDHQ8IZJ6 230 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 GCSAMQ8N6F7 178 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 GRAMD2BQ96HH9 432 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 ZNF257Q9Y2Q1 563 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
SDF4-207ENST00000494748 CORTO00230 105 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
SDF4-207ENST00000494748 TNFSF4P23510 183 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 SSBP2P81877 361 aaPredicted RBP12.48□□□□□ -0.41
SDF4-207ENST00000494748 RTL8BQ17RB0 113 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms