RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 PINX1Q96BK5 328 aaKnown RBP8.6□□□□□ -1.03
VTI1A-208ENST00000494728 FKBP11Q9NYL4 201 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
VTI1A-208ENST00000494728 EXTL2Q9UBQ6 330 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 SMPXQ9UHP9 88 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 FAM25AB3EWG3 89 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 FAM25CB3EWG5 89 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 FAM25GB3EWG6 89 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 ST8SIA3O43173 380 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 JTBO76095 146 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-208ENST00000494728 PGAM2P15259 253 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 TFPI2P48307 235 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 RORCP51449 518 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 HSPE1P61604 102 aaKnown RBP8.59□□□□□ -1.03
VTI1A-208ENST00000494728 SP6Q3SY56 376 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 RNASE10Q5GAN6 216 aaKnown RBP8.59□□□□□ -1.03
VTI1A-208ENST00000494728 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 FAM90A2PQ658T7 463 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 LPCAT3Q6P1A2 487 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 LYG2Q86SG7 212 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 NXF2Q9GZY0 626 aaKnown RBP8.59□□□□□ -1.03
VTI1A-208ENST00000494728 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
VTI1A-208ENST00000494728 OR4C46A6NHA9 309 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 NUPL2O15504 423 aaKnown RBP8.58□□□□□ -1.04
VTI1A-208ENST00000494728 SPRY2O43597 315 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 YIF1AO95070 293 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 CD74P04233 296 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 RNASE2P10153 161 aaKnown RBP8.58□□□□□ -1.04
VTI1A-208ENST00000494728 MFAP4P55083 255 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 TOMM20LQ6UXN7 152 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 Q6ZWC4 215 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 WFDC3Q8IUB2 231 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 ARRDC1Q8N5I2 433 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 FAM24BQ8N5W8 94 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 TMEM116Q8NCL8 245 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 OR13C8Q8NGS7 320 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 LHFPL5Q8TAF8 219 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 ST8SIA2Q92186 375 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 FNDC4Q9H6D8 234 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-208ENST00000494728 MAP6D1Q9H9H5 199 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
VTI1A-208ENST00000494728 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 C3orf85A0A1B0GTC6 90 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 A0A1B0GU03 582 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 ZNF182P17025 639 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-208ENST00000494728 S100GP29377 79 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 AKR1C2P52895 323 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 APOC4P55056 127 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 RELQ04864 619 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-208ENST00000494728 TNFRSF9Q07011 255 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 SPCS2Q15005 226 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 LAMTOR1Q6IAA8 161 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 Q6ZRM9 215 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 GBGT1Q8N5D6 347 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 MARCH1Q8TCQ1 289 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 RNF183Q96D59 192 aa8.57□□□□□ -1.04
VTI1A-208ENST00000494728 ZNF486Q96H40 463 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-208ENST00000494728 KIR2DL5BA0A0G2JN68 375 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 KIR2DL5BA0A0G2JPC4 375 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 CTDSP2O14595 271 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 GNG7O60262 68 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 TBPP20226 339 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 UCP1P25874 307 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 BMI1P35226 326 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 ETV6P41212 452 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 MLANAQ16655 118 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 SCGB2B2Q4G0G5 96 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 MZT2AQ6P582 158 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 KIR2DL5AQ8N109 375 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 SLC35G3Q8N808 338 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 TXN2Q99757 166 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 VSIRQ9H7M9 311 aa8.56□□□□□ -1.04
VTI1A-208ENST00000494728 PUS1Q9Y606 427 aaKnown RBP eCLIP8.56□□□□□ -1.04
VTI1A-208ENST00000494728 TRAV14DV4A0A0A6YYC5 116 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 CXorf65A6NEN9 183 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 INS-IGF2F8WCM5 200 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 ALDH3B2P48448 385 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 ERHP84090 104 aaKnown RBP8.55□□□□□ -1.04
VTI1A-208ENST00000494728 TRIM16LQ309B1 348 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 BSXQ3C1V8 233 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 STEAP1BQ6NZ63 245 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 STPG3Q8N7X2 389 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 TMEM229BQ8NBD8 167 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 AP3S1Q92572 193 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 RTBDNQ9BSG5 229 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-208ENST00000494728 PRR13Q9NZ81 148 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
VTI1A-208ENST00000494728 UBE2CO00762 179 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 DFFBO76075 338 aa8.54□□□□□ -1.04
VTI1A-208ENST00000494728 RAB3DO95716 219 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms