RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 WDR61Q9GZS3 305 aaKnown RBP1.19□□□□□ -2.22
NCL-210ENST00000494618 IL20Q9NYY1 176 aa1.19□□□□□ -2.22
NCL-210ENST00000494618 PIK3C2AO00443 1686 aa1.19□□□□□ -2.22
NCL-210ENST00000494618 MYOM1P52179 1685 aa1.19□□□□□ -2.22
NCL-210ENST00000494618 ADCY9O60503 1353 aa1.19□□□□□ -2.22
NCL-210ENST00000494618 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
NCL-210ENST00000494618 C2CD3Q4AC94 2353 aa1.19□□□□□ -2.22
NCL-210ENST00000494618 TTC28Q96AY4 2481 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 SCAF11Q99590 1463 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 TRBV6-5A0A0K0K1A5 114 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 INMT-MINDY4F8WBC2 141 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 MRPS14O60783 128 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 RPP14O95059 124 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 IFNA10P01566 189 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 PMP2P02689 132 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 PPBPP02775 128 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 SERPINA6P08185 405 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BOP23527 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BBP33778 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BDP58876 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BCP62807 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 GUK1Q16774 197 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST2H2BEQ16778 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 Q1T7F1 81 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 ARHGAP11BQ3KRB8 267 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 SPANXN3Q5MJ09 141 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 SYPL2Q5VXT5 272 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 Q6ZS49 121 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 MRPL30Q8TCC3 161 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BHQ93079 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BNQ99877 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 HIST1H2BMQ99879 126 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 ULBP3Q9BZM4 244 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 EPRSP07814 1512 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 CPS1P31327 1500 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 DLC1Q96QB1 1528 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 FAM208BQ5VWN6 2430 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 FLT4P35916 1363 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 RNF17Q9BXT8 1623 aaKnown RBP1.18□□□□□ -2.22
NCL-210ENST00000494618 BIVM-ERCC5R4GMW8 1640 aa1.18□□□□□ -2.22
NCL-210ENST00000494618 ZNF292O60281 2723 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 NCOA1Q15788 1441 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 CASZ1Q86V15 1759 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 TPRP12270 2363 aaKnown RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 IGKV3D-7A0A0C4DH55 119 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 IGKV3OR2-268A0A0C4DH90 116 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 A0A0D9SG52 128 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 A0A0J9YY10 115 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 A0A1B0GX78 115 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 HLA-DRB1P01911 266 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 GPX2P18283 190 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 RPS4Y1P22090 263 aaKnown RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 ZNF80P51504 273 aaPredicted RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 AQP4P55087 323 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 ACOT6Q3I5F7 207 aaPredicted RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 FAM27BQ5VT28 67 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 SPOPLQ6IQ16 392 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 C8orf74Q6P047 294 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 UNQ6190/PRO20217Q6UXQ8 127 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 FP248Q71RG6 208 aaPredicted RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 AAED1Q7RTV5 226 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 DEFB128Q7Z7B8 93 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 Q96M85 177 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 SCGB3A1Q96QR1 104 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 NIPSNAP1Q9BPW8 284 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 OR8D2Q9GZM6 311 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 BAIAP2Q9UQB8 552 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 PHLPP1O60346 1717 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 TEX14Q8IWB6 1497 aa1.17□□□□□ -2.22
NCL-210ENST00000494618 DICER1Q9UPY3 1922 aaKnown RBP1.17□□□□□ -2.22
NCL-210ENST00000494618 CCDC144AA2RUR9 1427 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 SCAPERQ9BY12 1400 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 DNAH12Q6ZR08 3092 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 PQLC2LA1A4F0 135 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 HIST1H1TP22492 207 aaPredicted RBP1.16□□□□□ -2.22
NCL-210ENST00000494618 HBA1P69905 142 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 DPPA3Q6W0C5 159 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 TRAPPC5Q8IUR0 188 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 OR6V1Q8N148 313 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 OR51D1Q8NGF3 324 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 BORCS7Q96B45 105 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 CCDC42Q96M95 316 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 SERPINI1Q99574 410 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 DERL1Q9BUN8 251 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 C20orf27Q9GZN8 174 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 MIXL1Q9H2W2 232 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 TMEM56-RWDD3S4R434 201 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 SLX4Q8IY92 1834 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 IBTKQ9P2D0 1353 aaPredicted RBP1.16□□□□□ -2.22
NCL-210ENST00000494618 UHRF1BP1LA0JNW5 1464 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 WIZO95785 1651 aa1.16□□□□□ -2.22
NCL-210ENST00000494618 MALRD1Q5VYJ5 2156 aa1.15□□□□□ -2.22
NCL-210ENST00000494618 EEA1Q15075 1411 aa1.15□□□□□ -2.22
NCL-210ENST00000494618 BRCA2P51587 3418 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms