RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ETV6P41212 452 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 ZNF414Q96IQ9 312 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 C20orf24Q9BUV8 137 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 SLIRPQ9GZT3 109 aaKnown RBP11.68□□□□□ -0.54
LIMS2-216ENST00000494613 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 GAR1Q9NY12 217 aaKnown RBP11.68□□□□□ -0.54
LIMS2-216ENST00000494613 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
LIMS2-216ENST00000494613 TEX13DA0A0J9YY54 714 aaPredicted RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 B3GALNT1O75752 331 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 CDS2O95674 445 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 IFNA17P01571 189 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 AKAIN1P0CW23 69 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 SNCAP37840 140 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 AKR1C2P52895 323 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 Q6ZRM9 215 aa11.67□□□□□ -0.54
LIMS2-216ENST00000494613 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 DAZ1Q9NQZ3 744 aaKnown RBP11.67□□□□□ -0.54
LIMS2-216ENST00000494613 A0A0G2JRQ6 117 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 FABP12A6NFH5 140 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 INS-IGF2F8WCM5 200 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 H3BMQ9 156 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 NUPL2O15504 423 aaKnown RBP11.66□□□□□ -0.54
LIMS2-216ENST00000494613 GSTZ1O43708 216 aaPredicted RBP11.66□□□□□ -0.54
LIMS2-216ENST00000494613 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 LAMTOR1Q6IAA8 161 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 OR4C16Q8NGL9 310 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 ISOC1Q96CN7 298 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 NXF2Q9GZY0 626 aaKnown RBP11.66□□□□□ -0.54
LIMS2-216ENST00000494613 TMEM222Q9H0R3 208 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 RETNQ9HD89 108 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 RSL24D1Q9UHA3 163 aaKnown RBP11.66□□□□□ -0.54
LIMS2-216ENST00000494613 SMPXQ9UHP9 88 aa11.66□□□□□ -0.54
LIMS2-216ENST00000494613 C14orf166Q9Y224 244 aaKnown RBP11.66□□□□□ -0.54
LIMS2-216ENST00000494613 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.54
LIMS2-216ENST00000494613 TSPAN4O14817 238 aa11.65□□□□□ -0.54
LIMS2-216ENST00000494613 YIF1AO95070 293 aa11.65□□□□□ -0.54
LIMS2-216ENST00000494613 SUB1P53999 127 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 MLANAQ16655 118 aa11.65□□□□□ -0.54
LIMS2-216ENST00000494613 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 OR51S1Q8NGJ8 323 aa11.65□□□□□ -0.54
LIMS2-216ENST00000494613 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-216ENST00000494613 GNG7O60262 68 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM50AO95807 157 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 DHODHQ02127 395 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 PVRIGQ6DKI7 326 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 MCFD2Q8NI22 146 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 LHFPL5Q8TAF8 219 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
LIMS2-216ENST00000494613 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 RNASE2P10153 161 aaKnown RBP11.63□□□□□ -0.55
LIMS2-216ENST00000494613 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 FAM219AQ8IW50 185 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 RNASE11Q8TAA1 199 aaKnown RBP11.63□□□□□ -0.55
LIMS2-216ENST00000494613 RBPMSQ93062 196 aaKnown RBP11.63□□□□□ -0.55
LIMS2-216ENST00000494613 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 SPAG8Q99932 426 aaPredicted RBP11.63□□□□□ -0.55
LIMS2-216ENST00000494613 PRRT1Q99946 306 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 FAM110AQ9BQ89 295 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 RHPN1-AS1Q9BWJ2 59 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 KCNIP3Q9Y2W7 256 aa11.63□□□□□ -0.55
LIMS2-216ENST00000494613 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
LIMS2-216ENST00000494613 IGHV3-49A0A0A0MS15 119 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 TRAV14DV4A0A0A6YYC5 116 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 CHEK1O14757 476 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 NPBWR1P48145 328 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 SPCS3P61009 180 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 RNF2Q99496 336 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 UBQLN2Q9UHD9 624 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 SCP2D1Q9UJQ7 156 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
LIMS2-216ENST00000494613 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-216ENST00000494613 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
LIMS2-216ENST00000494613 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
LIMS2-216ENST00000494613 SCGB3A2Q96PL1 93 aa11.61□□□□□ -0.55
LIMS2-216ENST00000494613 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM187Q14656 261 aa11.6□□□□□ -0.55
LIMS2-216ENST00000494613 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
LIMS2-216ENST00000494613 TMEM230Q96A57 120 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms