RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-225	ENST00000494446	RNF212	Q495C1	297 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446		Q5BKY6	102 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	LY6G6F	Q5SQ64	297 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	GLIPR1L1	Q6UWM5	242 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	UNQ9165/PRO28630	Q6UXU0	137 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	LYPD1	Q8N2G4	141 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	C6orf223	Q8N319	242 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	C9orf62	Q8N4C0	152 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	BEST4	Q8NFU0	473 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	OR51S1	Q8NGJ8	323 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	IL1F10	Q8WWZ1	152 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	ASB13	Q8WXK3	278 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	ZNF503	Q96F45	646 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	S100A13	Q99584	98 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.9	□□□□□ -1.63
FN1-225	ENST00000494446	GINS4	Q9BRT9	223 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	NICN1	Q9BSH3	213 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	TM2D1	Q9BX74	207 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	TMEM59	Q9BXS4	323 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	SCP2D1	Q9UJQ7	156 aa		4.9	□□□□□ -1.63
FN1-225	ENST00000494446	IGHV3-35	A0A0C4DH35	117 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446		A0A1W2PP11	408 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	FAM90A7P	A6NKC0	464 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SSNA1	O43805	119 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SSX5	O60225	188 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ZNF780A	O75290	641 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	IGLV2-23	P01705	113 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	CRYGB	P07316	175 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	GSTT2	P0CG29	244 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ANXA7	P20073	488 aa	Known RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	CBX5	P45973	191 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	TMEM50B	P56557	158 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	KRTAP10-2	P60368	255 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	RPS27A	P62979	156 aa	Known RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ARL6IP1	Q15041	203 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	C12orf74	Q32Q52	190 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	CDNF	Q49AH0	187 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SLC22A6	Q4U2R8	563 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	PLAC9	Q5JTB6	97 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SERTAD4-AS1	Q5TG53	156 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	PDPN	Q86YL7	162 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	GAPT	Q8N292	157 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ZNF383	Q8NA42	475 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	OR56B1	Q8NGI3	324 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	OR13C8	Q8NGS7	320 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SRSF12	Q8WXF0	261 aa	Known RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	CYYR1	Q96J86	154 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	OR2A7	Q96R45	310 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	PRRT1	Q99946	306 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SEC22C	Q9BRL7	303 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	URM1	Q9BTM9	101 aa	Known RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	SPACA1	Q9HBV2	294 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	IL36G	Q9NZH8	169 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	ELF5	Q9UKW6	265 aa	Predicted RBP	4.89	□□□□□ -1.63
FN1-225	ENST00000494446	CELA1	Q9UNI1	258 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	KCNK7	Q9Y2U2	307 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	UFC1	Q9Y3C8	167 aa		4.89	□□□□□ -1.63
FN1-225	ENST00000494446	DISC1	C4P0D8	188 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	SMLR1	H3BR10	107 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	SOCS1	O15524	211 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	CTSD	P07339	412 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MIF	P14174	115 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MYOD1	P15172	320 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MGMT	P16455	207 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	GNB3	P16520	340 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	NPY1R	P25929	384 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	TFPI2	P48307	235 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	RAP2B	P61225	183 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	RNASE10	Q5GAN6	216 aa	Known RBP	4.88	□□□□□ -1.63
FN1-225	ENST00000494446	IDO2	Q6ZQW0	420 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	C19orf35	Q6ZS72	473 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	OR11H4	Q8NGC9	324 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MRPL30	Q8TCC3	161 aa	Known RBP	4.88	□□□□□ -1.63
FN1-225	ENST00000494446	ZNF431	Q8TF32	576 aa	Predicted RBP	4.88	□□□□□ -1.63
FN1-225	ENST00000494446	NUDCD2	Q8WVJ2	157 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MRGPRF	Q96AM1	343 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	RAB3C	Q96E17	227 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446		Q96M66	194 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	HARBI1	Q96MB7	349 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	SELENOI	Q9C0D9	397 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	IFT46	Q9NQC8	304 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	SLC35D1	Q9NTN3	355 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446	MGAT4C	Q9UBM8	478 aa		4.88	□□□□□ -1.63
FN1-225	ENST00000494446		F8W735	103 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-225	ENST00000494446		M0QYG6	137 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	PROP1	O75360	226 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	CRTAP	O75718	401 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-225	ENST00000494446	SNAPC5	O75971	98 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	SMR3B	P02814	79 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-225	ENST00000494446	RLN1	P04808	185 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	CLEC3B	P05452	202 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	OR4E1	P0C645	316 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	RPA2	P15927	270 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	HLA-G	P17693	338 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	ELL	P55199	621 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-225	ENST00000494446	XG	P55808	180 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	CMC4	P56277	68 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-225	ENST00000494446	GNG2	P59768	71 aa		4.87	□□□□□ -1.63
FN1-225	ENST00000494446	UBE2M	P61081	183 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms