RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 OR10J4P0C629 311 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 PATE4P0C8F1 98 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 KITLGP21583 273 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 TGFBR3Q03167 851 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 MZT1Q08AG7 82 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 OR8G2PQ6IF36 304 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 H2BFWTQ7Z2G1 175 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 TEX29Q8N6K0 151 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 RDH5Q92781 318 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 SNHG12Q9BXW3 62 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 IL36BQ9NZH7 164 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 OR1A1Q9P1Q5 309 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 PPP1R3CQ9UQK1 317 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
PDLIM1-205ENST00000493949 COL7A1Q02388 2944 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 M0R1B8 84 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 ITGB1BP1O14713 200 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 EREGO14944 169 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 NXPH3O95157 252 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 CD55P08174 381 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 STAG3L2P0CL84 134 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 STAG3L3P0CL85 134 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 HTD2P86397 168 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 TBC1D28Q2M2D7 210 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 OR10J3Q5JRS4 329 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 FAM78BQ5VT40 261 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 RASL11AQ6T310 242 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 OR10G8Q8NGN5 311 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 IL1F10Q8WWZ1 152 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 TMEM186Q96B77 213 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 SDSLQ96GA7 329 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 GNB1LQ9BYB4 327 aa8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 SLC25A10Q9UBX3 287 aaPredicted RBP8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.02
PDLIM1-205ENST00000493949 TRGV10A0A0A0MS01 117 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 C20orf202A1L168 122 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 IQCF6A8MYZ5 107 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 DLEU1O43261 78 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 OR3A1P47881 315 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 RAB31Q13636 194 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 TMEM30BQ3MIR4 351 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 TEX38Q6PEX7 206 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 C1orf229Q6ZS94 237 aaPredicted RBP8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 NECAP1Q8NC96 275 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 TMEM190Q8WZ59 177 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 ELOVL1Q9BW60 279 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 NCOR1P1Q9H4R4 102 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 HIF1ANQ9NWT6 349 aa8.64□□□□□ -1.03
PDLIM1-205ENST00000493949 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 HSPB6O14558 160 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 YPEL1O60688 119 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 HPRT1P00492 218 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 NGFP01138 241 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 CRISP2P16562 243 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 PPOXP50336 477 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 RHOBP62745 196 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 GNB1P62873 340 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 C9orf135Q5VTT2 229 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 PNKDQ8N490 385 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 OR5AU1Q8NGC0 362 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 OR1K1Q8NGR3 316 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 RBM14Q96PK6 669 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 YPEL2Q96QA6 119 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 RNF2Q99496 336 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 VAMP8Q9BV40 100 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 QTRT1Q9BXR0 403 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 OR2D2Q9H210 308 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
PDLIM1-205ENST00000493949 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 HAND1O96004 215 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 MSMBP08118 114 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 OR4A8P0C604 315 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 OR5G3P0C626 314 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 CCNOP22674 350 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 GCH1P30793 250 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 ERVK-16P61578 105 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 RPEL1Q2QD12 228 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 COL5A1-AS1Q5SY13 56 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 FAM162BQ5T6X4 162 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 KLHDC1Q8N7A1 406 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 Q8N7P7 452 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 SCCPDHQ8NBX0 429 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 GPHA2Q96T91 129 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 JPT1Q9UK76 154 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 GOLT1BQ9Y3E0 138 aa8.62□□□□□ -1.03
PDLIM1-205ENST00000493949 ZNF705FA8MVS1 300 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 B9A039 149 aa8.61□□□□□ -1.03
PDLIM1-205ENST00000493949 SPINT2O43291 252 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms