RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TNFSF13O75888 250 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 GLRXP35754 106 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 GZMMP51124 257 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 KLF17Q5JT82 389 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-221ENST00000493795 STPG1Q5TH74 334 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 PATE3B3GLJ2 98 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 MLNRO43193 412 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 PPIFP30405 207 aaKnown RBP6.59□□□□□ -1.35
BRCA1-221ENST00000493795 DUTP33316 252 aaKnown RBP6.59□□□□□ -1.35
BRCA1-221ENST00000493795 TNFRSF14Q92956 283 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 NPIPB5A8MRT5 1133 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 C1QTNF9P0C862 333 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 GATA2P23769 480 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM258P61165 79 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 IFITM2Q01629 132 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 TPTE2P1Q5T6R2 138 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 FAM90A1Q86YD7 464 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 ZNF114Q8NC26 417 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 C8orf46Q8TAG6 207 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 TRACP01848 142 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 CD33P20138 364 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 UCP1P25874 307 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 SIGLEC15Q6ZMC9 328 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 A0A1W2PQF6 199 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 A8MXK9 166 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 UPK2O00526 184 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 LTBRP36941 435 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 CD200R1LQ6Q8B3 271 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 RASL11AQ6T310 242 aa6.59□□□□□ -1.35
BRCA1-221ENST00000493795 SS18Q15532 418 aa6.59□□□□□ -1.36
BRCA1-221ENST00000493795 ZNF876PQ49A33 203 aa6.59□□□□□ -1.36
BRCA1-221ENST00000493795 Q5BKY6 102 aa6.59□□□□□ -1.36
BRCA1-221ENST00000493795 ZXDCQ2QGD7 858 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-221ENST00000493795 WFDC6Q9BQY6 131 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 TM2D1Q9BX74 207 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 NSUN5P1Q3KNT7 163 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 FDCSPQ8NFU4 85 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
BRCA1-221ENST00000493795 PRR19A6NJB7 356 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 PIN1P1O15428 100 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 Q6ZT83 130 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-221ENST00000493795 GUSBP1Q15486 140 aa6.58□□□□□ -1.36
BRCA1-221ENST00000493795 FAM216BQ8N7L0 139 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 A0A0G2JMM0 328 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 LOC105371267A0A1B0GV96 52 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 A0A1W2PPB8 328 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 C15orf61A6NNL5 157 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 KIR3DP1A8MWS1 328 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 IQCF6A8MYZ5 107 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 C9JAW5 83 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 VCYO14598 125 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 SLC25A48Q6ZT89 311 aaKnown RBP6.57□□□□□ -1.36
BRCA1-221ENST00000493795 LSM4Q9Y4Z0 139 aaKnown RBP6.57□□□□□ -1.36
BRCA1-221ENST00000493795 PAX8Q06710 450 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 TIMM21Q9BVV7 248 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 PHIPQ8WWQ0 1821 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
BRCA1-221ENST00000493795 UBE2CO00762 179 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 DLEU1O43261 78 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 TBX6O95947 436 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-221ENST00000493795 SELLP14151 372 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-221ENST00000493795 ADAMTSL5Q6ZMM2 481 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 C1QL4Q86Z23 238 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 IGHV3-73A0A0B4J1V6 119 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 IFI6P09912 130 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 PYYP10082 97 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 LHX2P50458 406 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 TFF2Q03403 129 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 GP6Q9HCN6 339 aa6.57□□□□□ -1.36
BRCA1-221ENST00000493795 TRGV1A0A0A0MS02 117 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 D6R8Y8 96 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 KIR3DS1Q14943 382 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 IMMP1LQ96LU5 166 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 REPIN1Q9BWE0 567 aaKnown RBP6.56□□□□□ -1.36
BRCA1-221ENST00000493795 C5P01031 1676 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BKO60814 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 CD5P06127 495 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BJP06899 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 COX6A1P12074 109 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BOP23527 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BBP33778 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BDP58876 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BCP62807 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST2H2BEQ16778 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-221ENST00000493795 CDCP2Q5VXM1 449 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 WFDC12Q8WWY7 111 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BHQ93079 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BNQ99877 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 HIST1H2BMQ99879 126 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 CRIM1Q9NZV1 1036 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 METRNQ9UJH8 293 aa6.56□□□□□ -1.36
BRCA1-221ENST00000493795 SAA2-SAA4A0A096LPE2 208 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms