RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 STXBP6Q8NFX7 210 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 HIST1H2BLQ99880 126 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 SLC25A33Q9BSK2 321 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF430Q9H8G1 570 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 AMMECR1Q9Y4X0 333 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 TRAPPC1Q9Y5R8 145 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 FRYQ5TBA9 3013 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 OR10J4P0C629 311 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 C1QTNF9P0C862 333 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 GNG4P50150 75 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 PPOXP50336 477 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 CNN1P51911 297 aaKnown RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 TIGITQ495A1 244 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 SPATA31B1PQ5VZV4 182 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 OR10W1Q8NGF6 305 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 OR5R1Q8NH85 324 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 EAF1Q96JC9 268 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-209ENST00000493732 RNF5Q99942 180 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 SCNM1Q9BWG6 230 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
NPHP3-209ENST00000493732 YLPM1P49750 1951 aaKnown RBP7.81□□□□□ -1.16
NPHP3-209ENST00000493732 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
NPHP3-209ENST00000493732 TRBV20OR9-2A0A075B6H5 130 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 IGKV1OR2-108A0A075B7D4 117 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 TRBV9A0A0B4J1U6 114 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-209ENST00000493732 TCRBV4S1A1TA0A5B7 111 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 COX7A2P2O60397 106 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 FOXH1O75593 365 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 IGLV2-23P01705 113 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 PLA2G5P39877 138 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 REG1BP48304 166 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 YPEL3P61236 119 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF90Q03938 601 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 PIP4P2Q8N4L2 257 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF114Q8NC26 417 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 BEND2Q8NDZ0 799 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 TMEM37Q8WXS4 190 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 TMEM190Q8WZ59 177 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 ZNRD1Q9P1U0 126 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 MSRB2Q9Y3D2 182 aa7.81□□□□□ -1.16
NPHP3-209ENST00000493732 ICE1Q9Y2F5 2266 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 FCN3O75636 299 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 GCGP01275 180 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 CA7P43166 264 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 TAS2R60P59551 318 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
NPHP3-209ENST00000493732 PAX2Q02962 417 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 RPEL1Q2QD12 228 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 PDZD11Q5EBL8 140 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 GFI1BQ5VTD9 330 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 C10orf113Q5VZT2 155 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 CLEC7AQ9BXN2 247 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 RP1L1Q8IWN7 2480 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-209ENST00000493732 ZGRF1Q86YA3 2104 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 ERVFC1-1P60608 527 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 WT1-ASQ06250 92 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
NPHP3-209ENST00000493732 PVRIGQ6DKI7 326 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 MUC15Q8N387 334 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
NPHP3-209ENST00000493732 OSTCQ9NRP0 149 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 INSIG2Q9Y5U4 225 aa7.8□□□□□ -1.16
NPHP3-209ENST00000493732 IGHV2-26A0A0B4J1V2 119 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 PSMB11A5LHX3 300 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 ISLRO14498 428 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 ENSAO43768 121 aaKnown RBP7.79□□□□□ -1.16
NPHP3-209ENST00000493732 SLC25A17O43808 307 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 IGLV1-47P01700 117 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 MT-ND6P03923 174 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 CRYBB3P26998 211 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 UBE2L3P68036 154 aaKnown RBP7.79□□□□□ -1.16
NPHP3-209ENST00000493732 PRSS8Q16651 343 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 CLEC12BQ2HXU8 276 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 OR2T6Q8NHC8 308 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 C8orf46Q8TAG6 207 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 LOC400499M0QZD8 3231 aa7.79□□□□□ -1.16
NPHP3-209ENST00000493732 PGPEP1LA6NFU8 196 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 AMBPP02760 352 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 CRYGCP07315 174 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 RPL27AP46776 148 aaKnown RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 PKIAP61925 76 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 SUMO1P63165 101 aaKnown RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 KLRB1Q12918 225 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 ZNF672Q499Z4 452 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 PRR30Q53SZ7 412 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-209ENST00000493732 CENPWQ5EE01 88 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 WDR73Q6P4I2 378 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 C11orf42Q8N5U0 333 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 ST6GALNAC3Q8NDV1 305 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 OR8B3Q8NGG8 313 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 NPIPB3Q92617 1050 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 PERPQ96FX8 193 aa7.78□□□□□ -1.16
NPHP3-209ENST00000493732 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms