RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 RBMY1EA6NEQ0 496 aaKnown RBP8□□□□□ -1.13
COL6A3-214ENST00000493608 A8MWP6 167 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 OR11H12B2RN74 326 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 RBMY1DP0C7P1 496 aaKnown RBP8□□□□□ -1.13
COL6A3-214ENST00000493608 TBPP20226 339 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 TMBIM6P55061 237 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 HSPE1P61604 102 aaKnown RBP8□□□□□ -1.13
COL6A3-214ENST00000493608 TRIM16LQ309B1 348 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 OR2C3Q8N628 320 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 MUC7Q8TAX7 377 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 ZFAND1Q8TCF1 268 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 ZNF486Q96H40 463 aaPredicted RBP8□□□□□ -1.13
COL6A3-214ENST00000493608 C20orf24Q9BUV8 137 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 ZNF436Q9C0F3 470 aaPredicted RBP8□□□□□ -1.13
COL6A3-214ENST00000493608 SRD5A3Q9H8P0 318 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 PALMDQ9NP74 551 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 ST8SIA3O43173 380 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 C8orf88P0DMB2 117 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 ETV6P41212 452 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 AKR1C2P52895 323 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 PRCDQ00LT1 54 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 RBPMS2Q6ZRY4 209 aaKnown RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 OR52B4Q8NGK2 314 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 OR4C16Q8NGL9 310 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 OR1P1Q8NH06 330 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 PINX1Q96BK5 328 aaKnown RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 BSCL2Q96G97 398 aaPredicted RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 FAM110AQ9BQ89 295 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 RTBDNQ9BSG5 229 aaPredicted RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 CCDC59Q9P031 241 aaKnown RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 MRPL27Q9P0M9 148 aaKnown RBP7.99□□□□□ -1.13
COL6A3-214ENST00000493608 UFC1Q9Y3C8 167 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 CEPT1Q9Y6K0 416 aa7.99□□□□□ -1.13
COL6A3-214ENST00000493608 KMT2CQ8NEZ4 4911 aaKnown RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 IGHV3-49A0A0A0MS15 119 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 A0A0G2JRQ6 117 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 DISC1C4P0D8 188 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 H3BMQ9 156 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 I3L2K1 104 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 MT-CO2P00403 227 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 IFNA17P01571 189 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 CTSDP07339 412 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 CTSGP08311 255 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 P0C879 139 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 AKAIN1P0CW23 69 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 TNFSF8P32971 234 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 ERHP84090 104 aaKnown RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 SSBP1Q04837 148 aaKnown RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 ZFAND6Q6FIF0 208 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 SPSB3Q6PJ21 355 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 LINC00322Q6ZN03 302 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 Q6ZRM9 215 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 CCDC71LQ8N9Z2 235 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 OR1L6Q8NGR2 347 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 SMIM4Q8WVI0 70 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 TMEM190Q8WZ59 177 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 ISOC1Q96CN7 298 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 SPATA25Q9BR10 227 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 SLIRPQ9GZT3 109 aaKnown RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 UBQLN2Q9UHD9 624 aa7.98□□□□□ -1.13
COL6A3-214ENST00000493608 C14orf166Q9Y224 244 aaKnown RBP7.98□□□□□ -1.13
COL6A3-214ENST00000493608 TEX13DA0A0J9YY54 714 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 NDUFA4O00483 81 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 CTDSPLO15194 276 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 NOL3O60936 208 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 YIF1AO95070 293 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 OR5AC1P0C628 307 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 UCP1P25874 307 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 MFAP4P55083 255 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 ELLP55199 621 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 MRPS10P82664 201 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 MEF2DQ14814 521 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 SLC16A13Q7RTY0 426 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 SLC35G3Q8N808 338 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 OR51S1Q8NGJ8 323 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 MCFD2Q8NI22 146 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 RNASE11Q8TAA1 199 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 LHFPL5Q8TAF8 219 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 RRNAD1Q96FB5 475 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 ZNF414Q96IQ9 312 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 BCL7BQ9BQE9 202 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 HIPK2Q9H2X6 1198 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 C5orf66Q9H5L9 145 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 NAA60Q9H7X0 242 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 GAR1Q9NY12 217 aaKnown RBP7.97□□□□□ -1.13
COL6A3-214ENST00000493608 PRR13Q9NZ81 148 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 GPR132Q9UNW8 380 aa7.97□□□□□ -1.13
COL6A3-214ENST00000493608 FABP12A6NFH5 140 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 CCDC160A6NGH7 325 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 NUPL2O15504 423 aaKnown RBP7.96□□□□□ -1.14
COL6A3-214ENST00000493608 LYL1P12980 280 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 SNCAP37840 140 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 KRTAP19-4Q3LI73 84 aa7.96□□□□□ -1.14
COL6A3-214ENST00000493608 SELENOHQ8IZQ5 122 aaKnown RBP7.96□□□□□ -1.14
COL6A3-214ENST00000493608 GLYATL2Q8WU03 294 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms