RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TEX45Q8NA69 505 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 OR9G4Q8NGQ1 327 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 NRGNQ92686 78 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 C8orf44Q96CB5 159 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 PRRG4Q9BZD6 226 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 C11orf1Q9H5F2 150 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 LINC00312Q9Y6C7 94 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 RALGAPA1Q6GYQ0 2036 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 PCNX3Q9H6A9 2034 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 PCSK5Q92824 1860 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 K7EN84 100 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 TNFRSF13BO14836 293 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-205ENST00000493587 ARL14EPLP0DKL9 152 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 TFF3Q07654 80 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 TMEFF1Q8IYR6 380 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 OR5AS1Q8N127 324 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 ZADH2Q8N4Q0 377 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 OXGR1Q96P68 337 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 LHFPL6Q9Y693 200 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 UNC13CQ8NB66 2214 aa5.7□□□□□ -1.5
VPS13B-205ENST00000493587 A0A0J9YW62 118 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 LOC107984640A0A0U1RRK4 108 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 C5orf49A4QMS7 147 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 SMAD7O15105 426 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 DUX1O43812 170 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 SLC25A5P05141 298 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 SP9P0CG40 484 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 REG1BP48304 166 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 FBXW4P57775 412 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 RPL27P61353 136 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 YPEL5P62699 121 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 DGAT2L6Q6ZPD8 337 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 RBMXL3Q8N7X1 1067 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 H1FXQ92522 213 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 DUX5Q96PT3 197 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM147Q9BVK8 224 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ARHGEF17Q96PE2 2063 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF138P52744 262 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 OR1D5P58170 312 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 SRSF2Q01130 221 aaKnown RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 HES1Q14469 280 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF502Q8TBZ5 544 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 LRRC29Q8WV35 223 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 PLEKHA3Q9HB20 300 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 CCL28Q9NRJ3 127 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM74BQ9NUR3 256 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 POLDIP2Q9Y2S7 368 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 V9GYV3 84 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 LOC107984156A0A0G2JMH3 177 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM8BA6NDV4 472 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 CGAP01215 116 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF137PP52743 207 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 FXYD2P54710 66 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 SGCBQ16585 318 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 NMSQ5H8A3 153 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF474Q6S9Z5 364 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ASCL4Q6XD76 172 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ASCL5Q7RTU5 278 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 LYPD6Q86Y78 171 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 ARL17AQ8IVW1 177 aa5.69□□□□□ -1.5
VPS13B-205ENST00000493587 TRAV24A0A0B4J272 114 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 A8MWL6 223 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 SPRY1O43609 319 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 RPL7P18124 248 aaKnown RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF816Q0VGE8 651 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM42Q69YG0 159 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 LCNL1Q6ZST4 164 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 SHISA5Q8N114 240 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 NT5CQ8TCD5 201 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 BMFQ96LC9 184 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 SIGLEC8Q9NYZ4 499 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 YTHDF2Q9Y5A9 579 aaKnown RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 KMT2EQ8IZD2 1858 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 KNL1Q8NG31 2342 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 IZUMO1RA6ND01 250 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 H0Y8X5 98 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 PRKNO60260 465 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 BCL3P20749 454 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 MALLQ13021 153 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 DIAPH2-AS1Q14236 149 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 ZNF818PQ6ZRF7 136 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 Q8TCH9 128 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 C1orf147Q96MC9 270 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 TIMM9Q9Y5J7 89 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 F5P12259 2224 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 IGKV1D-42A0A075B6H8 117 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 TRAV8-2A0A0B4J237 113 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 A0A0G2JRQ6 117 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 CD24P25063 80 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 PRDX1Q06830 199 aaKnown RBP5.68□□□□□ -1.5
VPS13B-205ENST00000493587 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 SLC22A18ASQ8N1D0 253 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 C10orf126Q8N4M7 172 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 GTSF1Q8WW33 167 aa5.68□□□□□ -1.5
VPS13B-205ENST00000493587 TMEM126AQ9H061 195 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms