RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, human

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LCOR-208	ENST00000493486	DNAH17	Q9UFH2	4485 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	PKHD1	P08F94	4074 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	IGHV3-49	A0A0A0MS15	119 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486		A0A0G2JLM5	398 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	OR2T8	A6NH00	312 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	C15orf61	A6NNL5	157 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	LGALS9	O00182	355 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	GPR31	O00270	319 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZNF207	O43670	478 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	GGCT	O75223	188 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	HRAS	P01112	189 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	CD74	P04233	296 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	SERPINE2	P07093	398 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	OR13C7	P0DN81	318 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZNF182	P17025	639 aa	Predicted RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZP3	P21754	424 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	MAS1L	P35410	378 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ARL3	P36405	182 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	CD81	P60033	236 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	SUPT4H1	P63272	117 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	RPEL1	Q2QD12	228 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ODF3L2	Q3SX64	289 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	PVRIG	Q6DKI7	326 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZFAND6	Q6FIF0	208 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	BTNL8	Q6UX41	500 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	GPHB5	Q86YW7	130 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	FAM24B	Q8N5W8	94 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	GDPD1	Q8N9F7	314 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	UXS1	Q8NBZ7	420 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZBTB34	Q8NCN2	500 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	OR6Q1	Q8NGQ2	317 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	OR5H2	Q8NGV7	314 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	OR4A5	Q8NH83	315 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	MUC7	Q8TAX7	377 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	SOST	Q9BQB4	213 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	NEURL2	Q9BR09	285 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	ZNF436	Q9C0F3	470 aa	Predicted RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	RBM38	Q9H0Z9	239 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	HIPK2	Q9H2X6	1198 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	C5orf66	Q9H5L9	145 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	FNDC4	Q9H6D8	234 aa	Predicted RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	HRASLS	Q9HDD0	168 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	IFT46	Q9NQC8	304 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	COMMD9	Q9P000	198 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	EXTL2	Q9UBQ6	330 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	MTFP1	Q9UDX5	166 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	PRELID3B	Q9Y3B1	194 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	F11R	Q9Y624	299 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	CEPT1	Q9Y6K0	416 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	DNAH11	Q96DT5	4516 aa		2.56	□□□□□ -2
LCOR-208	ENST00000493486	DYNC1H1	Q14204	4646 aa	Known RBP	2.56	□□□□□ -2
LCOR-208	ENST00000493486	IGHV3OR16-13	A0A075B7E8	117 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	IGHV3-74	A0A0B4J1X5	117 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486		A0A1B0GU03	582 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	ZNF320	A2RRD8	509 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486		H3BMQ9	156 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	ST8SIA3	O43173	380 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TGOLN2	O43493	480 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	SLC22A5	O76082	557 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	NXPH3	O95157	252 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TRAPPC2	P0DI81	140 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TRAPPC2B	P0DI82	140 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	PTBP1	P26599	531 aa	Known RBP eCLIP	2.55	□□□□□ -2	3e-10	■■■■■ 29.1
LCOR-208	ENST00000493486	RCVRN	P35243	200 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	CBX5	P45973	191 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	RORC	P51449	518 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	PPP5C	P53041	499 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	UCP3	P55916	312 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	PIGP	P57054	158 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TAS2R46	P59540	309 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	HERV-K104	P61576	105 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	PRCD	Q00LT1	54 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	CBX3	Q13185	183 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	MEF2D	Q14814	521 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	ZNF79	Q15937	498 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	BSX	Q3C1V8	233 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	AARD	Q4LEZ3	155 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	MORN5	Q5VZ52	161 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	FAM90A2P	Q658T7	463 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	CLVS1	Q8IUQ0	354 aa	Predicted RBP	2.55	□□□□□ -2
LCOR-208	ENST00000493486	CROCCP3	Q8IVE0	287 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	FAM219A	Q8IW50	185 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	CADM3	Q8N126	398 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486		Q8N402	240 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	OR2C3	Q8N628	320 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	DMBX1	Q8NFW5	382 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	OR4C16	Q8NGL9	310 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	OR6F1	Q8NGZ6	308 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	VSTM2A	Q8TAG5	236 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	MARCH1	Q8TCQ1	289 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	GLYATL2	Q8WU03	294 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TMEM190	Q8WZ59	177 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	TRIM63	Q969Q1	353 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	CMTM3	Q96MX0	182 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	RNF2	Q99496	336 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	OVOL2	Q9BRP0	275 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	ELOVL1	Q9BW60	279 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	HINT2	Q9BX68	163 aa		2.55	□□□□□ -2
LCOR-208	ENST00000493486	NXF2	Q9GZY0	626 aa	Known RBP	2.55	□□□□□ -2
LCOR-208	ENST00000493486	SCPEP1	Q9HB40	452 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms