RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 HIPK2Q9H2X6 1198 aa12.97□□□□□ -0.33
RER1-208ENST00000493207 TRBV7-1A0A0A6YYK4 115 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 PPP5D1E7EU14 171 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 BMPR1BO00238 502 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 CCSO14618 274 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 IGLL1P15814 213 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 HTR2BP41595 481 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 CLEC19AQ6UXS0 136 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 ZNF502Q8TBZ5 544 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 VN1R17PQ8TDU5 208 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 DLX4Q92988 240 aaPredicted RBP12.96□□□□□ -0.33
RER1-208ENST00000493207 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
RER1-208ENST00000493207 OR10C1Q96KK4 312 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
RER1-208ENST00000493207 PALMDQ9NP74 551 aa12.96□□□□□ -0.33
RER1-208ENST00000493207 FAM90A26D6RGX4 464 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 K7EIM0 57 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 PRAF2O60831 178 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 PTTG1O95997 202 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 ZP3P21754 424 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 ARL3P36405 182 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 BSXQ3C1V8 233 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
RER1-208ENST00000493207 MAGT1Q9H0U3 335 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
RER1-208ENST00000493207 FAM25EA8MYX2 175 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 I3L2K1 104 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 MED6O75586 246 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 MT-CO2P00403 227 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 CLEC3BP05452 202 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 IAPPP10997 89 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 GPR183P32249 361 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 IAH1Q2TAA2 248 aaPredicted RBP12.94□□□□□ -0.34
RER1-208ENST00000493207 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 UBAC2Q8NBM4 344 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 SLC24A4Q8NFF2 622 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 C21orf62Q9NYP8 219 aa12.94□□□□□ -0.34
RER1-208ENST00000493207 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 G3V4G9 280 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 OVOL1O14753 267 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 SYNGR2O43760 224 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 IFNA10P01566 189 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 IGHV3-48P01763 117 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 NPY1RP25929 384 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 DCTN2Q13561 401 aaKnown RBP12.93□□□□□ -0.34
RER1-208ENST00000493207 C2orf83Q53S99 150 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 PVRIGQ6DKI7 326 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 ZBTB8BQ8NAP8 495 aaPredicted RBP12.93□□□□□ -0.34
RER1-208ENST00000493207 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
RER1-208ENST00000493207 C5orf51A6NDU8 294 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 CORTO00230 105 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
RER1-208ENST00000493207 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 OPRK1P41145 380 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 NKX2-1P43699 371 aaPredicted RBP12.92□□□□□ -0.34
RER1-208ENST00000493207 SYNJ2BPP57105 145 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
RER1-208ENST00000493207 Q56UQ5 140 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 C1QL4Q86Z23 238 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
RER1-208ENST00000493207 U3KQ87 197 aa12.92□□□□□ -0.34
RER1-208ENST00000493207 MGAM2Q2M2H8 2515 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 SEC14L6B5MCN3 397 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
RER1-208ENST00000493207 WRBO00258 174 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 OR2C1O95371 312 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 ID3Q02535 119 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
RER1-208ENST00000493207 TGOLN2O43493 480 aa12.9□□□□□ -0.34
RER1-208ENST00000493207 MFAP4P55083 255 aa12.9□□□□□ -0.34
RER1-208ENST00000493207 POLR2GP62487 172 aaKnown RBP eCLIP12.9□□□□□ -0.34
RER1-208ENST00000493207 ACSM6Q6P461 480 aa12.9□□□□□ -0.34
RER1-208ENST00000493207 GSG1LQ6UXU4 331 aa12.9□□□□□ -0.34
RER1-208ENST00000493207 NOXA1Q86UR1 476 aa12.9□□□□□ -0.34
RER1-208ENST00000493207 BSCL2Q96G97 398 aaPredicted RBP12.9□□□□□ -0.34
RER1-208ENST00000493207 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
RER1-208ENST00000493207 FNDC4Q9H6D8 234 aaPredicted RBP12.9□□□□□ -0.34
RER1-208ENST00000493207 GOSR2O14653 212 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 SSSCA1O60232 199 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 MLANAQ16655 118 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 RGS21Q2M5E4 152 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 RNASEH2CQ8TDP1 164 aaKnown RBP12.89□□□□□ -0.35
RER1-208ENST00000493207 C2orf50Q96LR7 162 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 TXN2Q99757 166 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
RER1-208ENST00000493207 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
RER1-208ENST00000493207 IGHV3-35A0A0C4DH35 117 aa12.88□□□□□ -0.35
RER1-208ENST00000493207 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
RER1-208ENST00000493207 SSNA1O43805 119 aa12.88□□□□□ -0.35
RER1-208ENST00000493207 GNG7O60262 68 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms