RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PF4P02776 101 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 IFNA4P05014 189 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 CRYGCP07315 174 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
MSH6-208ENST00000493177 PAX9P55771 341 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 TAS2R30P59541 319 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 Q5BKY6 102 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 NOXA1Q86UR1 476 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 MISP3Q96FF7 219 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 OR4C12Q96R67 309 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 RNF126Q9BV68 326 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 FAM24AA6NFZ4 105 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 TSC22D2O75157 780 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 PPIFP30405 207 aaKnown RBP10.47□□□□□ -0.73
MSH6-208ENST00000493177 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
MSH6-208ENST00000493177 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 TMEM65Q6PI78 240 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 TCTE3Q8IZS6 198 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 ZNF114Q8NC26 417 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 OR1P1Q8NH06 330 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
MSH6-208ENST00000493177 C11orf1Q9H5F2 150 aa10.47□□□□□ -0.73
MSH6-208ENST00000493177 TSSC4Q9Y5U2 329 aaPredicted RBP10.47□□□□□ -0.73
MSH6-208ENST00000493177 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 SOX15O60248 233 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 OR2J3O76001 311 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 TRGV3P03979 118 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 METTL15P1P0C7V9 234 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 SLC25A4P12235 298 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 HIST1H1BP16401 226 aaKnown RBP10.46□□□□□ -0.73
MSH6-208ENST00000493177 CD33P20138 364 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 P2RY1P47900 373 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 TPPP2P59282 170 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 CFHR3Q02985 330 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 CD300CQ08708 224 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 OR8G2PQ6IF36 304 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 TEX38Q6PEX7 206 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 SLC25A31Q9H0C2 315 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 LYRM2Q9NU23 88 aaPredicted RBP10.46□□□□□ -0.73
MSH6-208ENST00000493177 THYN1Q9P016 225 aa10.46□□□□□ -0.73
MSH6-208ENST00000493177 IGHV3-21A0A0B4J1V1 117 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 H3BUA1 57 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 IGHG4P01861 327 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 MFAP2P55001 183 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
MSH6-208ENST00000493177 RHOGP84095 191 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 DEFA5Q01523 94 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 BSXQ3C1V8 233 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 ZNF546Q86UE3 836 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 STX12Q86Y82 276 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 TMEM252Q8N6L7 170 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 INO80EQ8NBZ0 244 aaPredicted RBP10.45□□□□□ -0.74
MSH6-208ENST00000493177 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 NEURL2Q9BR09 285 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
MSH6-208ENST00000493177 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 IGSF23A1L1A6 192 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 NUDT19A8MXV4 375 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 G3V3Q6 166 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 G3V4G9 280 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 CORTO00230 105 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 CST7O76096 145 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 NDUFB8O95169 186 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 ELANEP08246 267 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 LYL1P12980 280 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
MSH6-208ENST00000493177 OPRK1P41145 380 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 FOXE3Q13461 319 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 COMMD1Q8N668 190 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 RNASEH2CQ8TDP1 164 aaKnown RBP10.44□□□□□ -0.74
MSH6-208ENST00000493177 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
MSH6-208ENST00000493177 FANCD2OSQ96PS1 177 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 SLA2Q9H6Q3 261 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 DMRT1Q9Y5R6 373 aa10.44□□□□□ -0.74
MSH6-208ENST00000493177 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 WNK1Q9H4A3 2382 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 RPS10-NUDT3A0A1W2PQS6 291 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 ARPC5O15511 151 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 MT-CO2P00403 227 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 C1QBP02746 253 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 SULT1A1P50225 295 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 RAB9AP51151 201 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 AP2S1P53680 142 aaPredicted RBP10.43□□□□□ -0.74
MSH6-208ENST00000493177 EWSR1Q01844 656 aaKnown RBP eCLIP10.43□□□□□ -0.745e-7■■■■□ 21.4
MSH6-208ENST00000493177 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 EXOSC2Q13868 293 aaKnown RBP10.43□□□□□ -0.74
MSH6-208ENST00000493177 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 OR10P1Q8NGE3 313 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
MSH6-208ENST00000493177 TRRAPQ9Y4A5 3859 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms