RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 K7EIM0 57 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 MFNGO00587 321 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 CD5P06127 495 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 EIF4EP06730 217 aaKnown RBP8.6□□□□□ -1.03
GPNMB-214ENST00000492858 SERPINE2P07093 398 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 INAFM2P0DMQ5 153 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 RANBP1P43487 201 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 LSM3P62310 102 aaKnown RBP8.6□□□□□ -1.03
GPNMB-214ENST00000492858 WT1-ASQ06250 92 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 ZNF66Q6ZN08 573 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 Q6ZS49 121 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 ST8SIA2Q92186 375 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 FAM210BQ96KR6 192 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 DCSTAMPQ9H295 470 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
GPNMB-214ENST00000492858 F11RQ9Y624 299 aaKnown RBP8.6□□□□□ -1.03
GPNMB-214ENST00000492858 TRAV2A0A0B4J234 112 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 IGHV3-66A0A0C4DH42 116 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 UPK2O00526 184 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 TNFSF12O43508 249 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 TRAPPC2P0DI81 140 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 TRAPPC2BP0DI82 140 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 HIST1H1DP16402 221 aaKnown RBP8.59□□□□□ -1.03
GPNMB-214ENST00000492858 RAB6AP20340 208 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 OR10R2Q8NGX6 335 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 SLIRPQ9GZT3 109 aaKnown RBP8.59□□□□□ -1.03
GPNMB-214ENST00000492858 CCDC59Q9P031 241 aaKnown RBP8.59□□□□□ -1.03
GPNMB-214ENST00000492858 RAB22AQ9UL26 194 aa8.59□□□□□ -1.03
GPNMB-214ENST00000492858 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
GPNMB-214ENST00000492858 APOHP02749 345 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-214ENST00000492858 CTXN2P0C2S0 81 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 ACTL10Q5JWF8 245 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 THOC7Q6I9Y2 204 aaKnown RBP8.58□□□□□ -1.04
GPNMB-214ENST00000492858 HSD17B13Q7Z5P4 300 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-214ENST00000492858 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 C6orf223Q8N319 242 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 DUSP18Q8NEJ0 188 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 GINS3Q9BRX5 216 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 HINT2Q9BX68 163 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 VSIRQ9H7M9 311 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 ELF5Q9UKW6 265 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-214ENST00000492858 AGRNO00468 2067 aa8.58□□□□□ -1.04
GPNMB-214ENST00000492858 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 ZNF688P0C7X2 276 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 SPART-AS1P0CW21 52 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 NQO2P16083 231 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 ZNF182P17025 639 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-214ENST00000492858 DTYMKP23919 212 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 RORCP51449 518 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 TAS2R31P59538 309 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 MXD1Q05195 221 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 OR1L8Q8NGR8 309 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 SLC25A38Q96DW6 304 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 TMED3Q9Y3Q3 217 aa8.57□□□□□ -1.04
GPNMB-214ENST00000492858 TEX50A0A1B0GTY4 177 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 SULT1C2O00338 296 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 RBFOX2O43251 390 aaKnown RBP eCLIP8.56□□□□□ -1.04
GPNMB-214ENST00000492858 HTN3P15516 51 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 EMP1P54849 157 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 MFAP4P55083 255 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 POU2AF1Q16633 256 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 HES5Q5TA89 166 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 DMBX1Q8NFW5 382 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 OR5H6Q8NGV6 325 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
GPNMB-214ENST00000492858 NBDYA0A0U1RRE5 68 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 SMIM30A4D0T7 59 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 K7EQG2 157 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 HPRT1P00492 218 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 IGHV3-48P01763 117 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 FGF2P09038 288 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 FAM3BP58499 235 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-214ENST00000492858 TMEM88Q6PEY1 159 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 TOMM20LQ6UXN7 152 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 SECTM1Q8WVN6 248 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 LSM10Q969L4 123 aaKnown RBP8.55□□□□□ -1.04
GPNMB-214ENST00000492858 GRAMD2BQ96HH9 432 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 SOSTQ9BQB4 213 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 DAPK2Q9UIK4 370 aa8.55□□□□□ -1.04
GPNMB-214ENST00000492858 A0A0A6YYH2 397 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 A6NJ64 397 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 LGALS14Q8TCE9 139 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 MISP3Q96FF7 219 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 TXN2Q99757 166 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 ATG101Q9BSB4 218 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 C1QTNF4Q9BXJ3 329 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 MIXL1Q9H2W2 232 aa8.54□□□□□ -1.04
GPNMB-214ENST00000492858 TMEM231Q9H6L2 316 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms