RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CCDC71LQ8N9Z2 235 aa9.25□□□□□ -0.93
COL6A1-205ENST00000492851 RNF183Q96D59 192 aa9.25□□□□□ -0.93
COL6A1-205ENST00000492851 UBQLN2Q9UHD9 624 aa9.25□□□□□ -0.93
COL6A1-205ENST00000492851 C3orf85A0A1B0GTC6 90 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 ZNF207O43670 478 aaKnown RBP9.24□□□□□ -0.93
COL6A1-205ENST00000492851 IFNA17P01571 189 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 IGKV1-39P01597 117 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 IGKV1D-39P04432 117 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 AKR1C2P52895 323 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 PIGPP57054 158 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 SSBP1Q04837 148 aaKnown RBP9.24□□□□□ -0.93
COL6A1-205ENST00000492851 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 TERB2Q8NHR7 220 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
COL6A1-205ENST00000492851 RRNAD1Q96FB5 475 aaKnown RBP9.24□□□□□ -0.93
COL6A1-205ENST00000492851 RNF2Q99496 336 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 LYSTQ99698 3801 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 TMEM231Q9H6L2 316 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 ENY2Q9NPA8 101 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 COPZ2Q9P299 210 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 KLK11Q9UBX7 282 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 MTFP1Q9UDX5 166 aa9.24□□□□□ -0.93
COL6A1-205ENST00000492851 IGHV3OR16-8A0A075B7F1 116 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 CXorf65A6NEN9 183 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 MPTX1A8MV57 137 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 M0QYG6 137 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 TAS2R19P59542 299 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 MRPS10P82664 201 aaKnown RBP9.23□□□□□ -0.93
COL6A1-205ENST00000492851 DEFB135Q30KP9 77 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 SLC35G3Q8N808 338 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 TMEM229BQ8NBD8 167 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 CSTL1Q9H114 145 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 RABL2AQ9UBK7 228 aaPredicted RBP9.23□□□□□ -0.93
COL6A1-205ENST00000492851 EXTL2Q9UBQ6 330 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 CACFD1Q9UGQ2 172 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 RABL2BQ9UNT1 228 aa9.23□□□□□ -0.93
COL6A1-205ENST00000492851 KLK5Q9Y337 293 aaPredicted RBP9.23□□□□□ -0.93
COL6A1-205ENST00000492851 TRAV2A0A0B4J234 112 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 A0A0J9YWU9 116 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 A0A1W2PS18 150 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 DFFBO76075 338 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 GABARAPO95166 117 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 CD3DP04234 171 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 MEF2DQ14814 521 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 TRIM16LQ309B1 348 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 TOMM20LQ6UXN7 152 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 FAM219AQ8IW50 185 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 OR52I2Q8NH67 350 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 GATAD1Q8WUU5 269 aa9.22□□□□□ -0.93
COL6A1-205ENST00000492851 DNAH1Q9P2D7 4330 aa9.21□□□□□ -0.93
COL6A1-205ENST00000492851 TRAV30A0A087WSZ9 112 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 A0A0B4J293 547 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 GABARAPH6UMI1 98 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 DNASE2O00115 360 aaPredicted RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 ST8SIA3O43173 380 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 RAB3DO95716 219 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 TMEM50AO95807 157 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 IGKV1-5P01602 117 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 CD74P04233 296 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 RPL35AP18077 110 aaKnown RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 NPPCP23582 126 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 RPL5P46777 297 aaKnown RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 CTF1Q16619 201 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 PVRIGQ6DKI7 326 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 CEMP1Q6PRD7 247 aaPredicted RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 RNASE11Q8TAA1 199 aaKnown RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
COL6A1-205ENST00000492851 TP53RKQ96S44 253 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 ABHD1Q96SE0 405 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 VSIRQ9H7M9 311 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 RYR2Q92736 4967 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.94
COL6A1-205ENST00000492851 P0C879 139 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 PI3P19957 117 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 UCP1P25874 307 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 ETV6P41212 452 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 TFPI2P48307 235 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 SPCS3P61009 180 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
COL6A1-205ENST00000492851 DHODHQ02127 395 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 SURF2Q15527 256 aaPredicted RBP9.2□□□□□ -0.94
COL6A1-205ENST00000492851 SCGB2B2Q4G0G5 96 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 GPR107Q5VW38 600 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 STEAP1BQ6NZ63 245 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 APRG1Q8IVJ8 170 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 OR52E5Q8NH55 327 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.2□□□□□ -0.94
COL6A1-205ENST00000492851 C14orf166Q9Y224 244 aaKnown RBP9.2□□□□□ -0.94
COL6A1-205ENST00000492851 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL6A1-205ENST00000492851 STARD9Q9P2P6 4700 aa9.2□□□□□ -0.94
COL6A1-205ENST00000492851 IGHV3-49A0A0A0MS15 119 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 RPS10-NUDT3A0A1W2PQS6 291 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 DISC1C4P0D8 188 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 RGS5O15539 181 aa9.19□□□□□ -0.94
COL6A1-205ENST00000492851 CLN5O75503 358 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms