RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 ZIM3Q96PE6 472 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 CBLN4Q9NTU7 201 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 LINC00527Q9UJ94 153 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 NINQ8N4C6 2090 aa3.31□□□□□ -1.88
SND1-216ENST00000492840 PRR14LQ5THK1 2151 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 IGLV4-69A0A075B6H9 119 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 IGLV3-16A0A075B6K0 115 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 UQCRHLA0A096LP55 91 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 IGKV3D-11A0A0A0MRZ8 115 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 CCNKO75909 580 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 OR4A8P0C604 315 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 ALOX5APP20292 161 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 CNTFRP26992 372 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 MPIP34949 423 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 INPP1P49441 399 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 SULT1A1P50225 295 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 NAA20P61599 178 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 B2MP61769 119 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 RELAQ04206 551 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 BTN1A1Q13410 526 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 TMED2Q15363 201 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 TRMT12Q53H54 448 aaKnown RBP3.3□□□□□ -1.88
SND1-216ENST00000492840 LAIR2Q6ISS4 152 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 LCN8Q6JVE9 175 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 NEGR1Q7Z3B1 354 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 PHF13Q86YI8 300 aaPredicted RBP3.3□□□□□ -1.88
SND1-216ENST00000492840 YIPF7Q8N8F6 280 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 OR8A1Q8NGG7 326 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 MFSD8Q8NHS3 518 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 REEP6Q96HR9 211 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 DOHHQ9BU89 302 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 VCX3BQ9H321 246 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 ZNF430Q9H8G1 570 aaPredicted RBP3.3□□□□□ -1.88
SND1-216ENST00000492840 OPN4Q9UHM6 478 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 RWDD2AQ9UIY3 292 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 HDGFL3Q9Y3E1 203 aa3.3□□□□□ -1.88
SND1-216ENST00000492840 SAMHD1Q9Y3Z3 626 aaKnown RBP3.3□□□□□ -1.88
SND1-216ENST00000492840 LSM5Q9Y4Y9 91 aaKnown RBP3.3□□□□□ -1.88
SND1-216ENST00000492840 SCN3AQ9NY46 2000 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 STAB2Q8WWQ8 2551 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 ZNF860A6NHJ4 632 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 CLDN24A6NM45 220 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 B4DSR2 109 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 COPEO14579 308 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 OR7C2O60412 319 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 ZNF189O75820 626 aaPredicted RBP3.29□□□□□ -1.88
SND1-216ENST00000492840 C1QAP02745 245 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 LINC00869P0C866 280 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 MDKP21741 143 aaPredicted RBP3.29□□□□□ -1.88
SND1-216ENST00000492840 PSMB3P49720 205 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 BSPH1Q075Z2 132 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 TCF23Q7RTU1 214 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 SLC51BQ86UW2 128 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 CLDN22Q8N7P3 220 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 OR9A2Q8NGT5 310 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 OR2V1Q8NHB1 315 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 APOBEC3DQ96AK3 386 aaPredicted RBP3.29□□□□□ -1.88
SND1-216ENST00000492840 RAD51AP1Q96B01 352 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 ACY3Q96HD9 319 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 OR7D2Q96RA2 312 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 OR52B2Q96RD2 323 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 SDHCQ99643 169 aaPredicted RBP3.29□□□□□ -1.88
SND1-216ENST00000492840 RNF5Q99942 180 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 PECRQ9BY49 303 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 GNB1LQ9BYB4 327 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 BPESC1Q9GZL8 116 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 VPS29Q9UBQ0 182 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 ATPIF1Q9UII2 106 aa3.29□□□□□ -1.88
SND1-216ENST00000492840 PLXNB1O43157 2135 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 GMNCA6NCL1 334 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 SMIM9A6NGZ8 99 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 PSMD12O00232 456 aaPredicted RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 FADS1O60427 444 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 LY6HO94772 140 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 CRYBA1P05813 215 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 GDI2P50395 445 aaKnown RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 ZNF133P52736 654 aaPredicted RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 BTG2P78543 158 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 TMEM267Q0VDI3 215 aaPredicted RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 EBPQ15125 230 aaKnown RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 ZNF791Q3KP31 576 aaPredicted RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 ABCA11PQ4W5N1 156 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 NCBP2-AS2Q69YL0 99 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 NANOGP8Q6NSW7 305 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 STX12Q86Y82 276 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 OR8S1Q8NH09 359 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 OR51H1Q8NH63 302 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 EBNA1BP2Q99848 306 aaKnown RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 GTSF1LQ9H1H1 148 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 MMACHCQ9Y4U1 282 aa3.28□□□□□ -1.88
SND1-216ENST00000492840 CHCHD2Q9Y6H1 151 aaPredicted RBP3.28□□□□□ -1.88
SND1-216ENST00000492840 AGRNO00468 2067 aa3.28□□□□□ -1.89
SND1-216ENST00000492840 LOC285095A0A1B0GVY8 99 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms