RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TFF1P04155 84 aa17.55■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 ZNF726P1Q15940 193 aa17.55■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 C1orf162Q8NEQ5 155 aaPredicted RBP17.55■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SNHG12Q9BXW3 62 aa17.55■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SAA2-SAA4A0A096LPE2 208 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SAA2P0DJI9 122 aaPredicted RBP17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 CD33P20138 364 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 C1orf185Q5T7R7 199 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 COL4A3Q01955 1670 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 FOXI3A8MTJ6 420 aaPredicted RBP17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 PSPNO60542 156 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 PEAR1Q5VY43 1037 aaPredicted RBP17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 RBPMS2Q6ZRY4 209 aaKnown RBP17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 OR9G1Q8NH87 305 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 TM4SF5O14894 197 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 RPS20P60866 119 aaKnown RBP17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 MAP1LC3AQ9H492 121 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 GOSR1O95249 250 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SPATA31B1PQ5VZV4 182 aa17.54■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 APOHP02749 345 aaPredicted RBP17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SRSF9Q13242 221 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 A0A1B0GUT8 65 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 HS3ST6Q96QI5 342 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 IGHV2OR16-5A0A0B4J2B6 119 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 GLRXP35754 106 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 SEPSECSQ9HD40 501 aaKnown RBP17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 PLA2G2EQ9NZK7 142 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 IGLV3-1P01715 115 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 TYMSP04818 313 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 FCGR2BP31994 310 aaPredicted RBP17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 BMPERQ8N8U9 685 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 LPAR2Q9HBW0 351 aa17.53■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 B3GALT5-AS1P59052 145 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 HERVK_113P61574 105 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 FOXC1Q12948 553 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 TMEM136Q6ZRR5 245 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 C20orf144Q9BQM9 153 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 ZNF106Q9H2Y7 1883 aaKnown RBP17.52■□□□□ 0.4
CHKB-CPT1B-203ENST00000492556 GFRA1P56159 465 aa17.52■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 F11RQ9Y624 299 aaKnown RBP17.52■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 C15orf62A8K5M9 175 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 NKX2-8O15522 239 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PRCDQ00LT1 54 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 TCF24Q7RTU0 167 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 F5H697 171 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CA1P00915 261 aaPredicted RBP17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 FAM201AQ5SY85 155 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ATP1A1-AS1Q5TC04 95 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PNKDQ8N490 385 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CLEC5AQ9NY25 188 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 OR4A5Q8NH83 315 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ZNF414Q96IQ9 312 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 C1RLQ9NZP8 487 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SAA1P0DJI8 122 aaPredicted RBP17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SPANXN1Q5VSR9 72 aa17.51■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SNAI2O43623 268 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 LILRA1O75019 489 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 GPX1P07203 203 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CD69Q07108 199 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ERASQ7Z444 233 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 AREGP15514 252 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CDPF1Q6NVV7 123 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 TSKUQ8WUA8 353 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 RAB1BQ9H0U4 201 aa17.5■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 KIAA1671Q9BY89 1806 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 DOCK9Q9BZ29 2069 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 GPR183P32249 361 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 GNG5P63218 68 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CX3CL1P78423 397 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 FAM216BQ8N7L0 139 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PRR7Q8TB68 274 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 NOTCH4Q99466 2003 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 C3orf79P0CE67 100 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PYYP10082 97 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 NTF4P34130 210 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PSG9Q00887 426 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ZFP36L1Q07352 338 aaKnown RBP17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 TMUB1Q9BVT8 246 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 MRPL20Q9BYC9 149 aaKnown RBP17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 EPDR1Q9UM22 224 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SAPCD1Q5SSQ6 148 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ST20Q9HBF5 79 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 A0A1B0GW15 77 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 COLCA1Q6ZS62 124 aa17.49■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 LINC00473A8K010 186 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 FOXH1O75593 365 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 RPL7P18124 248 aaKnown RBP17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ATP5L2Q7Z4Y8 100 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SMIM13P0DJ93 91 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 RASL11AQ6T310 242 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PRELID3AQ96N28 172 aa17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 FOXA2Q9Y261 457 aaPredicted RBP17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 EP300Q09472 2414 aaPredicted RBP17.48■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 TRAV30A0A087WSZ9 112 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 Q9H3A6 140 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 FAM181BA6NEQ2 426 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 A0A1B0GUS0 222 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 Q0VG73 95 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms