RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF436Q9C0F3 470 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 INS-IGF2F8WCM5 200 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 K7EMT4 169 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 CORTO00230 105 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 GNG7O60262 68 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 UCP1P25874 307 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 NPBWR1P48145 328 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 PPP5CP53041 499 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 DHODHQ02127 395 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 OR4D10Q8NGI6 311 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 OR4C16Q8NGL9 310 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 TMEM190Q8WZ59 177 aa12.48□□□□□ -0.41
PDLIM2-217ENST00000491330 TENM3Q9P273 2699 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 CD5P06127 495 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 C8orf88P0DMB2 117 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 ETV6P41212 452 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 SPANXN2Q5MJ10 180 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 DUSP18Q8NEJ0 188 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 MLXQ9UH92 298 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 GPR132Q9UNW8 380 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
PDLIM2-217ENST00000491330 IGHV3-21A0A0B4J1V1 117 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 TEX13DA0A0J9YY54 714 aaPredicted RBP12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 C15orf62A8K5M9 175 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 CDS2O95674 445 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 APOC4P55056 127 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 PAFAH1B2P68402 229 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 IL22RA2Q969J5 263 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 PINX1Q96BK5 328 aaKnown RBP12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 TMEM222Q9H0R3 208 aa12.46□□□□□ -0.41
PDLIM2-217ENST00000491330 TSPAN4O14817 238 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 TOMM5Q8N4H5 51 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 OR51S1Q8NGJ8 323 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 GALNT14Q96FL9 552 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 HIPK2Q9H2X6 1198 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
PDLIM2-217ENST00000491330 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 P0C879 139 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 ANXA3P12429 323 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 PI3P19957 117 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 FCGR2BP31994 310 aaPredicted RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 HOXA1P49639 335 aaPredicted RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 SRPXP78539 464 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 CCDC190Q86UF4 302 aa12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 RBPMSQ93062 196 aaKnown RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 NARS2Q96I59 477 aaKnown RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 SLC25A21Q9BQT8 299 aaPredicted RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
PDLIM2-217ENST00000491330 TRAV14DV4A0A0A6YYC5 116 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 K7EIM0 57 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 MT-CO2P00403 227 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 AARDQ4LEZ3 155 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 TMEM116Q8NCL8 245 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 OR52E5Q8NH55 327 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 TMEM231Q9H6L2 316 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 EDA2RQ9HAV5 297 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 V9GYH0 126 aa12.43□□□□□ -0.42
PDLIM2-217ENST00000491330 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 UBE2CO00762 179 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 CTSGP08311 255 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 NOXA1Q86UR1 476 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 STPG3Q8N7X2 389 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 GLYATL2Q8WU03 294 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 CHRDL1Q9BU40 450 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 MCUBQ9NWR8 336 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 TMEM56-RWDD3S4R434 201 aa12.42□□□□□ -0.42
PDLIM2-217ENST00000491330 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 RBMY1BA6NDE4 496 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 RBMY1EA6NEQ0 496 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 JTBO76095 146 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 IGKV1-5P01602 117 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 OR5AC1P0C628 307 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 RBMY1DP0C7P1 496 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 EDN2P20800 178 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 MFAP2P55001 183 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 KLF9Q13886 244 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
PDLIM2-217ENST00000491330 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 DUXBA0A1W2PPF3 345 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms