RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-219ENST00000491128 AKR1C8PQ5T2L2 129 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 GNPNAT1Q96EK6 184 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-219ENST00000491128 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 CX3CL1P78423 397 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 DMRT1Q9Y5R6 373 aa11.06□□□□□ -0.64
SMPD4-219ENST00000491128 IGKV1OR2-108A0A075B7D4 117 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 NUPL2O15504 423 aaKnown RBP11.05□□□□□ -0.64
SMPD4-219ENST00000491128 OPRK1P41145 380 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 Q8N6K4 173 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 NPBQ8NG41 125 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 SFT2D1Q8WV19 159 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 MGST2Q99735 147 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 SSX3Q99909 188 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
SMPD4-219ENST00000491128 A0A1W2PN81 502 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 NDUFA3O95167 84 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 CHRNA7P36544 502 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 GAMTQ14353 236 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 LCN15Q6UWW0 184 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 IL17RELQ6ZVW7 336 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 LINC00518Q8N0U6 118 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 NARS2Q96I59 477 aaKnown RBP11.05□□□□□ -0.64
SMPD4-219ENST00000491128 GSX1Q9H4S2 264 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-219ENST00000491128 LINC00527Q9UJ94 153 aa11.05□□□□□ -0.64
SMPD4-219ENST00000491128 BRS3P32247 399 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 LOXL1Q08397 574 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-219ENST00000491128 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 BSXQ3C1V8 233 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 C2orf83Q53S99 150 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 FFAR4Q5NUL3 377 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 Q8N9W7 124 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 ZMAT5Q9UDW3 170 aaKnown RBP11.04□□□□□ -0.64
SMPD4-219ENST00000491128 TRAV20A0A0B4J274 112 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
SMPD4-219ENST00000491128 OOSP1A8MZH6 123 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 H3BUX3 64 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 B2MP61769 119 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 RPP25LQ8N5L8 163 aaKnown RBP11.03□□□□□ -0.64
SMPD4-219ENST00000491128 OR5T1Q8NG75 326 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 RNF5Q99942 180 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 CR1P17927 2039 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 TSPAN15O95858 294 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 MDKP21741 143 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-219ENST00000491128 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 ZNF709Q8N972 641 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 NPIPB3Q92617 1050 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 WNT10AQ9GZT5 417 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 PARP11Q9NR21 331 aa11.03□□□□□ -0.64
SMPD4-219ENST00000491128 KRBOX1C9JBD0 128 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 SOX15O60248 233 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 H2AFB1P0C5Y9 115 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 EBI3Q14213 229 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 ASPHD1Q5U4P2 390 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 SAT2Q96F10 170 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-219ENST00000491128 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 C9JQL5 133 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 BLOC1S1P78537 153 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 DLK1P80370 383 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 CD69Q07108 199 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 C9orf152Q5JTZ5 239 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.65
SMPD4-219ENST00000491128 TEPPQ6URK8 271 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 BPIFCQ8NFQ6 507 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 ARPC1AQ92747 370 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 RARRES2Q99969 163 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 RASL11BQ9BPW5 248 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 GGTLC1Q9BX51 225 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 MTORP42345 2549 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 ZNF90Q03938 601 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 ECSCRQ19T08 205 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 SPSB3Q6PJ21 355 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 OR10G4Q8NGN3 311 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 OR10G9Q8NGN4 311 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 OR10G7Q8NGN6 311 aa11.01□□□□□ -0.65
SMPD4-219ENST00000491128 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
SMPD4-219ENST00000491128 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
SMPD4-219ENST00000491128 G3V318 75 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 YIF1AO95070 293 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 IGHV3-23P01764 117 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
SMPD4-219ENST00000491128 OR10J1P30954 320 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 MAS1LP35410 378 aa11□□□□□ -0.65
SMPD4-219ENST00000491128 RND2P52198 227 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms