RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ECSCRQ19T08 205 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 VWC2Q2TAL6 325 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 CENPWQ5EE01 88 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 UNQ5815/PRO19632Q6UWF5 114 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 ARPC1AQ92747 370 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 SCO2A0A1W2PP80 73 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 SNURFLB1AK76 121 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 HLA-DQA1P01909 254 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 IER3P46695 156 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 RPL11P62913 178 aaKnown RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 PVRIGQ6DKI7 326 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF343Q6P1L6 599 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 C5orf17Q8NAS9 161 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 NEUROG1Q92886 237 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 IL36BQ9NZH7 164 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 LY96Q9Y6Y9 160 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 TNRC6BQ9UPQ9 1833 aaKnown RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 HTTP42858 3142 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 TRBV24-1A0A075B6N3 115 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 ATXN7O15265 892 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 IGLV2-14P01704 120 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 RNASE2P10153 161 aaKnown RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 RPL7P18124 248 aaKnown RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 LOXP28300 417 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 PAFAH1B2P68402 229 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 RIGQ13278 110 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 LY6DQ14210 128 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 Q6ZPA2 131 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 HAPLN4Q86UW8 402 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 GBGT1Q8N5D6 347 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 OR5R1Q8NH85 324 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 MS4A10Q96PG2 267 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 WNT10AQ9GZT5 417 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 EML6Q6ZMW3 1958 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 APCSP02743 223 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 TRGC1P0CF51 173 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 NOL4LQ96MY1 436 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-208ENST00000490993 TRGV9Q99603 122 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 C9JQL5 133 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 HSBP1O75506 76 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 NBEAP1P0C6P0 100 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 OR10W1Q8NGF6 305 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 RABAC1Q9UI14 185 aa5.99□□□□□ -1.45
NPHP3-208ENST00000490993 TIMM23O14925 209 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 WISP2O76076 250 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 IGKV1-16P04430 117 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 AMY1AP04745 511 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 ATP5J2P56134 94 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 TMEM249Q2WGJ8 235 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 GCSAMLQ5JQS6 135 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 SLC25A33Q9BSK2 321 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 NDUFA4L2Q9NRX3 87 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 C9JCJ5 164 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 PEX7O00628 323 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 SPINK4O60575 86 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 CDKN1AP38936 164 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 TCL1AP56279 114 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FAM90A2PQ658T7 463 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FAM168AQ92567 244 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FMC1Q96HJ9 113 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 MAP1BP46821 2468 aaKnown RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 A0A1B0GWJ7 208 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 M0QZ24 198 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 PLAUP00749 431 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 HOXA4Q00056 320 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FAM53AQ6NSI3 398 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 DUX4L9Q6RFH8 374 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 EEF1AKMT3Q96AZ1 226 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FAM103A1Q9BTL3 118 aaKnown RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 JKAMPQ9P055 326 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 SIGLEC9Q9Y336 463 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 AREGP15514 252 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 RAB4AP20338 218 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 NTF3P20783 257 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FCGR2BP31994 310 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
NPHP3-208ENST00000490993 TBL2Q9Y4P3 447 aaKnown RBP5.98□□□□□ -1.45
NPHP3-208ENST00000490993 DOCK10Q96BY6 2186 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 SERTM2A0A1B0GWG4 89 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 FBLL1A6NHQ2 334 aaKnown RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF253O75346 499 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 PRTN3P24158 256 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 RELQ04864 619 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 FBXL19-AS1Q494R0 122 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 TEX29Q8N6K0 151 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF439Q8NDP4 499 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 C8orf46Q8TAG6 207 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 HIF1ANQ9NWT6 349 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 CNOT1A5YKK6 2376 aaKnown RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 CACNA1HO95180 2353 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 GCGP01275 180 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 HOXA5P20719 270 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 GATA2P23769 480 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 MRPL54Q6P161 138 aaKnown RBP5.97□□□□□ -1.45
NPHP3-208ENST00000490993 PRNTQ86SH4 94 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 TMEM183AQ8IXX5 376 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 Q8NA96 180 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 METTL26Q96S19 204 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 OSTCQ9NRP0 149 aa5.97□□□□□ -1.45
NPHP3-208ENST00000490993 DCAF16Q9NXF7 216 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms