RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 RANGRFQ9HD47 186 aaPredicted RBP15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 MGAT4CQ9UBM8 478 aa15.42■□□□□ 0.06
SHROOM3-209ENST00000490690 L7N2F9 121 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 PF4P02776 101 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 PRH1P02810 166 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 MYCNOSP40205 109 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 VAMP2P63027 116 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 KIAA0141Q14154 515 aaPredicted RBP15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 ZNF343Q6P1L6 599 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 LCNL1Q6ZST4 164 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 DPF1Q92782 380 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 MISP3Q96FF7 219 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 TXN2Q99757 166 aa15.41■□□□□ 0.06
SHROOM3-209ENST00000490690 STAB1Q9NY15 2570 aa15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 A0A1W2PRX2 142 aa15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 I3L521 148 aa15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 ZP3P21754 424 aa15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 SMIM8Q96KF7 97 aa15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 PEF1Q9UBV8 284 aaKnown RBP15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 STRAPQ9Y3F4 350 aaKnown RBP15.4■□□□□ 0.06
SHROOM3-209ENST00000490690 TET2Q6N021 2002 aaPredicted RBP15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 ADARB2-AS1A8MUL3 147 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 SSSCA1O60232 199 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 TSC22D2O75157 780 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 MBPP02686 304 aaPredicted RBP15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 IFNA4P05014 189 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 OR8U8P0C7N1 319 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 SLC25A4P12235 298 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 FCGR2BP31994 310 aaPredicted RBP15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 OPRK1P41145 380 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 POLR2GP62487 172 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 MAGT1Q9H0U3 335 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 GNB4Q9HAV0 340 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 C21orf62Q9NYP8 219 aa15.39■□□□□ 0.05
SHROOM3-209ENST00000490690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 LINC01619G3V211 115 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 NDUFB8O95169 186 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 IGHV3-11P01762 117 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 IAPPP10997 89 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 NPBWR1P48145 328 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 S100A10P60903 97 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 RRAS2P62070 204 aaPredicted RBP15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 ZNF616Q08AN1 781 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 SPSB3Q6PJ21 355 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 C8orf86Q6ZUL3 223 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 PSENENQ9NZ42 101 aa15.38■□□□□ 0.05
SHROOM3-209ENST00000490690 CCL24O00175 119 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 MT-CO2P00403 227 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 MFAP4P55083 255 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 IL15RAQ13261 267 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 OR11H1Q8NG94 326 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 OR1N2Q8NGR9 330 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 CACNG8Q8WXS5 425 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 DCUN1D4Q92564 292 aa15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 PINX1Q96BK5 328 aaKnown RBP15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 BSCL2Q96G97 398 aaPredicted RBP15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 LSM5Q9Y4Y9 91 aaKnown RBP15.37■□□□□ 0.05
SHROOM3-209ENST00000490690 I3L2K1 104 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 K7EIM0 57 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 K7EPK0 472 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 GPX4P36969 197 aaPredicted RBP15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 MFAP2P55001 183 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 FGL1Q08830 312 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 SPANXN5Q5MJ07 72 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 C19orf35Q6ZS72 473 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 ZNF502Q8TBZ5 544 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 SCARB1Q8WTV0 552 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 RCL1Q9Y2P8 373 aaKnown RBP15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 DMRT1Q9Y5R6 373 aa15.36■□□□□ 0.05
SHROOM3-209ENST00000490690 TRAV30A0A087WSZ9 112 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 H2BFSP57053 126 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 RAB32Q13637 225 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 FHL3Q13643 280 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 ETV3LQ6ZN32 361 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 OR5B12Q96R08 314 aa15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 PAIP2BQ9ULR5 123 aaKnown RBP15.35■□□□□ 0.05
SHROOM3-209ENST00000490690 E5RGE8 158 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 GGCTO75223 188 aaKnown RBP15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 DEDDO75618 318 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 SIX6O95475 246 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 GIPP09681 153 aaPredicted RBP15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 RPEL1Q2QD12 228 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 Q56UQ5 140 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 ACSM6Q6P461 480 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 PPP1R1CQ8WVI7 109 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 SLC35E1Q96K37 410 aa15.34■□□□□ 0.05
SHROOM3-209ENST00000490690 TENM1Q9UKZ4 2725 aa15.33■□□□□ 0.05
SHROOM3-209ENST00000490690 MFSD2BA6NFX1 497 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 C15orf62A8K5M9 175 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 NUPL2O15504 423 aaKnown RBP15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 GNG7O60262 68 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 ARL3P36405 182 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 BCAP31P51572 246 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 RAP2BP61225 183 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 RELQ04864 619 aaPredicted RBP15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 CD69Q07108 199 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 FCN2Q15485 313 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 PRR31Q5SQ13 230 aa15.33■□□□□ 0.04
SHROOM3-209ENST00000490690 STX12Q86Y82 276 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms