RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 PHLDA2Q53GA4 152 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 SPSB3Q6PJ21 355 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF841Q6ZN19 808 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 VMO1Q7Z5L0 202 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 OR52M1Q8NGK5 317 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 OR10G4Q8NGN3 311 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 OR2G3Q8NGZ4 309 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 C8orf46Q8TAG6 207 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 FAM213BQ8TBF2 198 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 SSMEM1Q8WWF3 244 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 LHX4Q969G2 390 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 RBMXL1Q96E39 390 aaKnown RBP3.79□□□□□ -1.8
CSTF1-205ENST00000490539 GNPNAT1Q96EK6 184 aaPredicted RBP3.79□□□□□ -1.8
CSTF1-205ENST00000490539 URB1-AS1Q96HZ7 61 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF488Q96MN9 340 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 TMEM56Q96MV1 263 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF714Q96N38 554 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 GAFA1Q96PS6 74 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 C20orf24Q9BUV8 137 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 TOLLIPQ9H0E2 274 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 PARP12Q9H0J9 701 aaKnown RBP3.79□□□□□ -1.8
CSTF1-205ENST00000490539 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 HES4Q9HCC6 221 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 LYRM2Q9NU23 88 aaPredicted RBP3.79□□□□□ -1.8
CSTF1-205ENST00000490539 MTCH1Q9NZJ7 389 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 OR6C3Q9NZP0 311 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 FBXO7Q9Y3I1 522 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 TMEM56-RWDD3S4R434 201 aa3.79□□□□□ -1.8
CSTF1-205ENST00000490539 TRAV1-1A0A0B4J248 108 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 IGKV1-12A0A0C4DH73 117 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 FAM24AA6NFZ4 105 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF729A6NN14 1252 aaPredicted RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SEC14L6B5MCN3 397 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 H3BQ15 152 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SIRPB1O00241 398 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ANGPTL7O43827 346 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 OR2H2O95918 312 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 PPYP01298 95 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 IGKV1D-12P01611 117 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SLC25A6P12236 298 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 GZMHP20718 246 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 FUT3P21217 361 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 PRTN3P24158 256 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 TAGLN2P37802 199 aaKnown RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 CEACAM3P40198 252 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 NKX2-1P43699 371 aaPredicted RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 RPS10P46783 165 aaKnown RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 NPBWR2P48146 333 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 UBE2E1P51965 193 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 OR2B8PP59922 312 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 HILS1P60008 231 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 UBE2KP61086 200 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 KIAA0141Q14154 515 aaPredicted RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 MPV17LQ2QL34 196 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 PIGYQ3MUY2 71 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 KHDC3LQ587J8 217 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 AKR1C8PQ5T2L2 129 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 C9orf139Q6ZV77 190 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SLC35E3Q7Z769 313 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF695Q8IW36 515 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SELENOHQ8IZQ5 122 aaKnown RBP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 BATF2Q8N1L9 274 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 CD177Q8N6Q3 437 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 SLC35G3Q8N808 338 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 HSD17B11Q8NBQ5 300 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 LY6G5BQ8NDX9 201 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 Q8NFD4 153 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 C22orf15Q8WYQ4 148 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 IL22RA2Q969J5 263 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 TVP23CQ96ET8 276 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 TP53RKQ96S44 253 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 RARRES2Q99969 163 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 GGACTQ9BVM4 153 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 CTDSP1Q9GZU7 261 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 TMEM222Q9H0R3 208 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 KCNIP1Q9NZI2 227 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ZNF581Q9P0T4 197 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 CTSZQ9UBR2 303 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 ST3GAL6Q9Y274 331 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 PUS1Q9Y606 427 aaKnown RBP eCLIP3.78□□□□□ -1.8
CSTF1-205ENST00000490539 LINC00312Q9Y6C7 94 aa3.78□□□□□ -1.8
CSTF1-205ENST00000490539 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 CENPVL3A0A0U1RRI6 287 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 A0A1B0GUS0 222 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 TMEM30CPA0ZSE6 113 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 ODAMA1E959 279 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 NPFFO15130 113 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 SPINT2O43291 252 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 NDUFS6O75380 124 aaKnown RBP3.77□□□□□ -1.81
CSTF1-205ENST00000490539 DFFBO76075 338 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 CTXN2P0C2S0 81 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 IGHV4-38-2P0DP08 117 aa3.77□□□□□ -1.81
CSTF1-205ENST00000490539 VDAC1P21796 283 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms