RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 LPCAT4Q643R3 524 aa0.62□□□□□ -2.31
ITGA4-211ENST00000490435 IQCF2Q8IXL9 164 aa0.62□□□□□ -2.31
ITGA4-211ENST00000490435 OR13C4Q8NGS5 318 aa0.62□□□□□ -2.31
ITGA4-211ENST00000490435 TERB2Q8NHR7 220 aa0.62□□□□□ -2.31
ITGA4-211ENST00000490435 SCGB3A1Q96QR1 104 aa0.62□□□□□ -2.31
ITGA4-211ENST00000490435 LSM5Q9Y4Y9 91 aaKnown RBP0.62□□□□□ -2.31
ITGA4-211ENST00000490435 SNAPC4Q5SXM2 1469 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 ZNF106Q9H2Y7 1883 aaKnown RBP0.61□□□□□ -2.31
ITGA4-211ENST00000490435 IGKV1-9A0A0C4DH69 117 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 PRB4P10163 310 aaPredicted RBP0.61□□□□□ -2.31
ITGA4-211ENST00000490435 HBA1P69905 142 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 OR2F1Q13607 317 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 HIST3H3Q16695 136 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 OR4D11Q8NGI4 311 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 MCFD2Q8NI22 146 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 SLC50A1Q9BRV3 221 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 FBXL12Q9NXK8 326 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 LAMA4Q16363 1823 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 MCM3APO60318 1980 aa0.61□□□□□ -2.31
ITGA4-211ENST00000490435 HECW1Q76N89 1606 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 A0A087WX48 190 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 TGIF2-C20orf24A0A0A6YYL0 155 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 C2orf70A6NJV1 201 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 OR2T1O43869 369 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 HLA-DRB1P01911 266 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 CALB1P05937 261 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 ASAH2BP0C7U1 165 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 HIST1H1EP10412 219 aaKnown RBP0.6□□□□□ -2.31
ITGA4-211ENST00000490435 SPI1P17947 270 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 HIST1H1TP22492 207 aaPredicted RBP0.6□□□□□ -2.31
ITGA4-211ENST00000490435 MAGOHP61326 146 aaKnown RBP0.6□□□□□ -2.31
ITGA4-211ENST00000490435 PDE6HQ13956 83 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 OBSCN-AS1Q96MR7 158 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 HECW2Q9P2P5 1572 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 PLXND1Q9Y4D7 1925 aa0.6□□□□□ -2.31
ITGA4-211ENST00000490435 EML5Q05BV3 1969 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 WRNQ14191 1432 aaPredicted RBP eCLIP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 RIC1Q4ADV7 1423 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 MIFP14174 115 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 BRS3P32247 399 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 SNRPD2P62316 118 aaKnown RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 HIST2H3PS2Q5TEC6 136 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 MIR17HGQ75NE6 70 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 BPIFA4PQ86YQ2 179 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 CLVS1Q8IUQ0 354 aaPredicted RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 DDI1Q8WTU0 396 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 H1FXQ92522 213 aaKnown RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 NIPSNAP1Q9BPW8 284 aa0.59□□□□□ -2.31
ITGA4-211ENST00000490435 MRPL57Q9BQC6 102 aaKnown RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 C11orf68Q9H3H3 251 aaKnown RBP0.59□□□□□ -2.31
ITGA4-211ENST00000490435 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
ITGA4-211ENST00000490435 ECM29Q5VYK3 1845 aa0.59□□□□□ -2.32
ITGA4-211ENST00000490435 SCN3AQ9NY46 2000 aa0.59□□□□□ -2.32
ITGA4-211ENST00000490435 MTUS2Q5JR59 1369 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 DENND4CQ5VZ89 1909 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 TRBV6-7A0A0A0MS04 114 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 BUB1B-PAK6H3BSN5 160 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 KCNK1O00180 336 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 FAAHO00519 579 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 OR1I1O60431 355 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 IFNA5P01569 189 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 COX6A1P12074 109 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 NKX2-5P52952 324 aaPredicted RBP0.58□□□□□ -2.32
ITGA4-211ENST00000490435 SPCS3P61009 180 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 C20orf196Q8IYI0 205 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 LINC00471Q8N535 108 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 TOMM6Q96B49 74 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 IMP4Q96G21 291 aaKnown RBP0.58□□□□□ -2.32
ITGA4-211ENST00000490435 PPP1R2P1Q96PQ5 205 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 OR52E6Q96RD3 313 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 MRPS26Q9BYN8 205 aaKnown RBP0.58□□□□□ -2.32
ITGA4-211ENST00000490435 PRTFDC1Q9NRG1 225 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 GUCA1BQ9UMX6 200 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 SBF1O95248 1867 aa0.58□□□□□ -2.32
ITGA4-211ENST00000490435 NUP155O75694 1391 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 ADGRB2O60241 1585 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 TRAV1-1A0A0B4J248 108 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 A0A0D9SG52 128 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 DPRXA6NFQ7 191 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 GOLGA6L19H0YKK7 550 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 PSMD12O00232 456 aaPredicted RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 ZNF93P35789 620 aaPredicted RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 RPL5P46777 297 aaKnown RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 RPS20P60866 119 aaKnown RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 KCNJ8Q15842 424 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 C8orf74Q6P047 294 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 PHF13Q86YI8 300 aaPredicted RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 OR5A1Q8NGJ0 315 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 ZNF418Q8TF45 676 aaPredicted RBP0.57□□□□□ -2.32
ITGA4-211ENST00000490435 LINC00526Q96FQ7 95 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 TSPAN32Q96QS1 320 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 MIXL1Q9H2W2 232 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 PKIGQ9Y2B9 76 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 ZFP30Q9Y2G7 519 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
ITGA4-211ENST00000490435 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
ITGA4-211ENST00000490435 EXOC1LA0A1B0GW35 172 aa0.56□□□□□ -2.32
ITGA4-211ENST00000490435 HYPMO75409 117 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms