RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SNURFQ9Y675 71 aa1□□□□□ -2.25
CD46-216ENST00000490278 STRCQ7RTU9 1775 aa1□□□□□ -2.25
CD46-216ENST00000490278 HEATR5BQ9P2D3 2071 aa1□□□□□ -2.25
CD46-216ENST00000490278 RNASE3P12724 160 aaKnown RBP0.99□□□□□ -2.25
CD46-216ENST00000490278 KCNJ8Q15842 424 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 DEFB128Q7Z7B8 93 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 ANKRD29Q8N6D5 301 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 OR4D11Q8NGI4 311 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 AQP3Q92482 292 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 TOMM6Q96B49 74 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 C11orf68Q9H3H3 251 aaKnown RBP0.99□□□□□ -2.25
CD46-216ENST00000490278 TRABDQ9H4I3 376 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 PKIGQ9Y2B9 76 aa0.99□□□□□ -2.25
CD46-216ENST00000490278 DPRXA6NFQ7 191 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 FAAHO00519 579 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 CHP2O43745 196 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 IFNA10P01566 189 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 RPL5P46777 297 aaKnown RBP0.98□□□□□ -2.25
CD46-216ENST00000490278 UBE2IP63279 158 aaKnown RBP0.98□□□□□ -2.25
CD46-216ENST00000490278 Q6ZQT0 140 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 MIR17HGQ75NE6 70 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 CLVS1Q8IUQ0 354 aaPredicted RBP0.98□□□□□ -2.25
CD46-216ENST00000490278 TERB2Q8NHR7 220 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 ODF3Q96PU9 254 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 VPS29Q9UBQ0 182 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 TMEM56-RWDD3S4R434 201 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 TOPBP1Q92547 1522 aa0.98□□□□□ -2.25
CD46-216ENST00000490278 WRNQ14191 1432 aaPredicted RBP eCLIP0.98□□□□□ -2.25
CD46-216ENST00000490278 DIDO1Q9BTC0 2240 aaKnown RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 ADCY9O60503 1353 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 NUP155O75694 1391 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 MTUS2Q5JR59 1369 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 IGKV1D-42A0A075B6H8 117 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 TRAV9-1A0A075B6T8 112 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 A0A0D9SG52 128 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 EXOC1LA0A1B0GW35 172 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 CTSDP07339 412 aaPredicted RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 CRYGAP11844 174 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 FKBP2P26885 142 aaKnown RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 CTAG1AP78358 180 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 TEX36Q5VZQ5 186 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 SPOPLQ6IQ16 392 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 DPPA3Q6W0C5 159 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 OR4C6Q8NH72 309 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 DNAJC9Q8WXX5 260 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 H1FXQ92522 213 aaKnown RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 DCUN1D1Q96GG9 259 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 SLC50A1Q9BRV3 221 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 PARD6GQ9BYG4 376 aaPredicted RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 MRPL27Q9P0M9 148 aaKnown RBP0.97□□□□□ -2.25
CD46-216ENST00000490278 ARFGEF3Q5TH69 2177 aa0.97□□□□□ -2.25
CD46-216ENST00000490278 PQLC2LA1A4F0 135 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 CLDN24A6NM45 220 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 GEMIN2O14893 280 aaKnown RBP0.96□□□□□ -2.26
CD46-216ENST00000490278 FADS1O60427 444 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 SERPINA6P08185 405 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 COX6A1P12074 109 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 SPI1P17947 270 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 RPS20P60866 119 aaKnown RBP0.96□□□□□ -2.26
CD46-216ENST00000490278 KHDC3LQ587J8 217 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 SPANXN5Q5MJ07 72 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 CLDN22Q8N7P3 220 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 OR4E2Q8NGC2 313 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 TSPAN32Q96QS1 320 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 ULBP3Q9BZM4 244 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 PARVGQ9HBI0 331 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 CCDC88AQ3V6T2 1871 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 RIC1Q4ADV7 1423 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 KIF13BQ9NQT8 1826 aa0.96□□□□□ -2.26
CD46-216ENST00000490278 DLG5Q8TDM6 1919 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 TRAV26-2A0A0B4J265 109 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 OR4C46A6NHA9 309 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 CRYZL1O95825 349 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 BRS3P32247 399 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 OMPP47874 163 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 PHF13Q86YI8 300 aaPredicted RBP0.95□□□□□ -2.26
CD46-216ENST00000490278 OR5A1Q8NGJ0 315 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 C8orf76Q96K31 380 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 CCDC42Q96M95 316 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 TMEM147Q9BVK8 224 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 SLC39A9Q9NUM3 307 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 ERGIC3Q9Y282 383 aa0.95□□□□□ -2.26
CD46-216ENST00000490278 BUB1B-PAK6H3BSN5 160 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 TCL1BO95988 128 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 TTRP02766 147 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 ASAH2BP0C7U1 165 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 DEFA1P59665 94 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 RHEBQ15382 184 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 DEFB115Q30KQ5 88 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 TRAPPC5Q8IUR0 188 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 HIST3H2BBQ8N257 126 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 SIGLECL1Q8N7X8 197 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 OR8J2Q8NGG1 315 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 MIXL1Q9H2W2 232 aa0.94□□□□□ -2.26
CD46-216ENST00000490278 A0A087WX48 190 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 PIRO00625 290 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 SMIM10L2AP0DMW4 78 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 SMIM10L2BP0DMW5 78 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 CEBPGP53567 150 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms