RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
SRSF4-204ENST00000489898 TBPP20226 339 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 PIGPP57054 158 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 ZNF124Q15973 351 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 GUCA2BQ16661 112 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 PLET1Q6UQ28 207 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 SMIM4Q8WVI0 70 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 TMEM230Q96A57 120 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 ZNF486Q96H40 463 aaPredicted RBP8.75□□□□□ -1.01
SRSF4-204ENST00000489898 SOSTQ9BQB4 213 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 SLC2A8Q9NY64 477 aa8.75□□□□□ -1.01
SRSF4-204ENST00000489898 ZNF320A2RRD8 509 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 ST8SIA3O43173 380 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 MT-CO2P00403 227 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 FAM106AQ4KMX7 169 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 RNASE10Q5GAN6 216 aaKnown RBP8.74□□□□□ -1.01
SRSF4-204ENST00000489898 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 LILRB2Q8N423 598 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 TMEM229BQ8NBD8 167 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 OR4C16Q8NGL9 310 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 SPAG8Q99932 426 aaPredicted RBP8.74□□□□□ -1.01
SRSF4-204ENST00000489898 RTBDNQ9BSG5 229 aaPredicted RBP8.74□□□□□ -1.01
SRSF4-204ENST00000489898 HINT2Q9BX68 163 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
SRSF4-204ENST00000489898 PALMDQ9NP74 551 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 UFC1Q9Y3C8 167 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
SRSF4-204ENST00000489898 PKD1P98161 4303 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 A0A1B0GU03 582 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 C15orf62A8K5M9 175 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 GABARAPH6UMI1 98 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 K7EMT4 169 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 ZNF207O43670 478 aaKnown RBP8.73□□□□□ -1.01
SRSF4-204ENST00000489898 APOHP02749 345 aaPredicted RBP8.73□□□□□ -1.01
SRSF4-204ENST00000489898 HSPE1P61604 102 aaKnown RBP8.73□□□□□ -1.01
SRSF4-204ENST00000489898 SLC25A24Q6NUK1 477 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 WFDC3Q8IUB2 231 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 OR52B4Q8NGK2 314 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 MARCH1Q8TCQ1 289 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 GLYATL2Q8WU03 294 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 TRIM63Q969Q1 353 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 RNF2Q99496 336 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 GGTLC1Q9BX51 225 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 THYN1Q9P016 225 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 UBQLN2Q9UHD9 624 aa8.73□□□□□ -1.01
SRSF4-204ENST00000489898 HERC2O95714 4834 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 IGHV7-4-1A0A0J9YVY3 117 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 FAM25AB3EWG3 89 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 FAM25CB3EWG5 89 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 FAM25GB3EWG6 89 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 CHEK1O14757 476 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 CTDSPLO15194 276 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 CTSDP07339 412 aaPredicted RBP8.72□□□□□ -1.01
SRSF4-204ENST00000489898 TSPAN5P62079 268 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 SP6Q3SY56 376 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 FAM24BQ8N5W8 94 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 OR1L6Q8NGR2 347 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 TMEM56Q96MV1 263 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 VSIRQ9H7M9 311 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 SMPXQ9UHP9 88 aa8.72□□□□□ -1.01
SRSF4-204ENST00000489898 C3orf85A0A1B0GTC6 90 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 SNAPC5O75971 98 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 CDS2O95674 445 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 OR5AC1P0C628 307 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
SRSF4-204ENST00000489898 SSBP1Q04837 148 aaKnown RBP8.71□□□□□ -1.02
SRSF4-204ENST00000489898 STEAP1BQ6NZ63 245 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 H2BFWTQ7Z2G1 175 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 TERB2Q8NHR7 220 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 TMEM222Q9H0R3 208 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 FKBP11Q9NYL4 201 aa8.71□□□□□ -1.02
SRSF4-204ENST00000489898 IGHV3-49A0A0A0MS15 119 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 ANKRD20A5PA0PJZ0 165 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 NXPH3O95157 252 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 RAB3DO95716 219 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 IGKV1-17P01599 117 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 INPP1P49441 399 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 TAS2R19P59542 299 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 DEFA1P59665 94 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 DEFA3P59666 94 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 SLC16A13Q7RTY0 426 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 UBAC2Q8NBM4 344 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 ST8SIA2Q92186 375 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 MISP3Q96FF7 219 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 DIRAS2Q96HU8 199 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 MAP6D1Q9H9H5 199 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 GPR132Q9UNW8 380 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 V9GYH0 126 aa8.7□□□□□ -1.02
SRSF4-204ENST00000489898 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
SRSF4-204ENST00000489898 LOC102724200A0A096LPH7 203 aaPredicted RBP8.69□□□□□ -1.02
SRSF4-204ENST00000489898 NUPL2O15504 423 aaKnown RBP8.69□□□□□ -1.02
SRSF4-204ENST00000489898 GSTZ1O43708 216 aaPredicted RBP8.69□□□□□ -1.02
SRSF4-204ENST00000489898 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
SRSF4-204ENST00000489898 PGAM2P15259 253 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms