RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 A0A1W2PRM7 423 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 NBR2O15453 112 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 WIPF1O43516 503 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 IGKV1D-33P01593 117 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 IGKV1-33P01594 117 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 S100A6P06703 90 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
TRIM40-208ENST00000489892 CHRNA7P36544 502 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 PRB3Q04118 309 aaPredicted RBP9.37□□□□□ -0.91
TRIM40-208ENST00000489892 EBI3Q14213 229 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 PLGLAQ15195 96 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 MMDQ15546 238 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM41BQ5BJD5 291 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 NPBQ8NG41 125 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
TRIM40-208ENST00000489892 MEGF9Q9H1U4 602 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 IGHV3-72A0A0B4J1Y9 119 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 RRHO14718 337 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 SLC25A17O43808 307 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 OR9G9P0C7N8 305 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM11P17152 192 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 HNF1AP20823 631 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 FHITP49789 147 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 OR2B8PP59922 312 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 ICAM4Q14773 271 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 IZUMO4Q1ZYL8 232 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 DTD1Q8TEA8 209 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 EAF1Q96JC9 268 aaPredicted RBP9.36□□□□□ -0.91
TRIM40-208ENST00000489892 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
TRIM40-208ENST00000489892 ABCA1O95477 2261 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 C17orf112F2Z3M2 114 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 UBE2CO00762 179 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 NDUFA3O95167 84 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 BCL2P10415 239 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 CR1P17927 2039 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 RAB5AP20339 215 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 PSG5Q15238 335 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 PRSS8Q16651 343 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 LDLRAD2Q5SZI1 272 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 RBMS3Q6XE24 437 aaKnown RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 C16orf82Q7Z2V1 217 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 PPP1R27Q86WC6 154 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 QTRT1Q9BXR0 403 aaKnown RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 RBKSQ9H477 322 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 HEYLQ9NQ87 328 aaPredicted RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
TRIM40-208ENST00000489892 TCF19Q9Y242 345 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
TRIM40-208ENST00000489892 INS-IGF2F8WCM5 200 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 M0QZK8 103 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
TRIM40-208ENST00000489892 OR2C1O95371 312 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 METTL15P1P0C7V9 234 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 OR13C7P0DN81 318 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 COMPP49747 757 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-208ENST00000489892 RAB11AP62491 216 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 ERHP84090 104 aaKnown RBP9.34□□□□□ -0.91
TRIM40-208ENST00000489892 RUNX1Q01196 453 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 Q8N6K4 173 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 MAPK1IP1LQ8NDC0 245 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 TAF15Q92804 592 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRIM40-208ENST00000489892 ZNF430Q9H8G1 570 aaPredicted RBP9.34□□□□□ -0.91
TRIM40-208ENST00000489892 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 MXRA5Q9NR99 2828 aa9.34□□□□□ -0.91
TRIM40-208ENST00000489892 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 H3BP45 60 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 H3BQ15 152 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 CD5LO43866 347 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 MPDU1O75352 247 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 NXPH3O95157 252 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 LY6G6DO95868 133 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 FSHBP01225 129 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 S100A9P06702 114 aaKnown RBP9.33□□□□□ -0.92
TRIM40-208ENST00000489892 CRYGBP07316 175 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 IAPPP10997 89 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms