RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 CTSZQ9UBR2 303 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 H3BTX0 84 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 LY6HO94772 140 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 RUSC1-AS1Q66K80 236 aa12.76□□□□□ -0.37
BRD9-208ENST00000489816 PYYP10082 97 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 FLYWCH2Q96CP2 140 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 SERTAD4Q9NUC0 356 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 IER3P46695 156 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRR20EP86478 221 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRR20CP86479 221 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRR20DP86480 221 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRR20BP86481 221 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 PRR20AP86496 221 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 Q8NA96 180 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 SLC45A2Q9UMX9 530 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 RNASE2P10153 161 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 ADMP35318 185 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
BRD9-208ENST00000489816 ELOVL5Q9NYP7 299 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 LINC00312Q9Y6C7 94 aa12.75□□□□□ -0.37
BRD9-208ENST00000489816 APOA2P02652 100 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
BRD9-208ENST00000489816 SRP14P37108 136 aaKnown RBP12.74□□□□□ -0.37
BRD9-208ENST00000489816 WT1-ASQ06250 92 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 KRTCAP3Q53RY4 240 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 CENPWQ5EE01 88 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 OR8I2Q8N0Y5 310 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 ADTRPQ96IZ2 230 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 F2Z2F3 143 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 H0YJW9 148 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 NDUFB3O43676 98 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 CNTFRP26992 372 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 RAB4BP61018 213 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
BRD9-208ENST00000489816 TMEM106BQ9NUM4 274 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 CELSR1Q9NYQ6 3014 aa12.74□□□□□ -0.37
BRD9-208ENST00000489816 A0A087X0M5 115 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 A0A1B0GX30 115 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 HELTA6NFD8 242 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 TGOLN2O43493 480 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 OR5G3P0C626 314 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 GAL3ST2Q9H3Q3 398 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 FNDC4Q9H6D8 234 aaPredicted RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 TMEM178BH3BS89 294 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 MOSP00540 346 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 GRNP28799 593 aaKnown RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 TMEM144Q7Z5S9 345 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
BRD9-208ENST00000489816 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
BRD9-208ENST00000489816 GNG4P50150 75 aa12.72□□□□□ -0.37
BRD9-208ENST00000489816 C14orf144Q96I85 54 aa12.72□□□□□ -0.37
BRD9-208ENST00000489816 SPG11Q96JI7 2443 aa12.72□□□□□ -0.37
BRD9-208ENST00000489816 ORM2P19652 201 aa12.72□□□□□ -0.37
BRD9-208ENST00000489816 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
BRD9-208ENST00000489816 TEX36Q5VZQ5 186 aa12.72□□□□□ -0.37
BRD9-208ENST00000489816 RNASE6Q93091 150 aaKnown RBP12.72□□□□□ -0.37
BRD9-208ENST00000489816 E7EQL1 145 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 COX7A1P24310 79 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 ERHP84090 104 aaKnown RBP12.71□□□□□ -0.37
BRD9-208ENST00000489816 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 MISP3Q96FF7 219 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.37
BRD9-208ENST00000489816 FCN1O00602 326 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 TOX4O94842 621 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 CD69Q07108 199 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 JOSD1Q15040 202 aaPredicted RBP12.71□□□□□ -0.37
BRD9-208ENST00000489816 LRRC10Q5BKY1 277 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
BRD9-208ENST00000489816 OR5AU1Q8NGC0 362 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 BLNKQ8WV28 456 aa12.71□□□□□ -0.37
BRD9-208ENST00000489816 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.38
BRD9-208ENST00000489816 MT-CO2P00403 227 aa12.71□□□□□ -0.38
BRD9-208ENST00000489816 DDTP30046 118 aa12.71□□□□□ -0.38
BRD9-208ENST00000489816 TDGF1P3P51864 188 aa12.71□□□□□ -0.38
BRD9-208ENST00000489816 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.38
BRD9-208ENST00000489816 A0A1W2PRD5 423 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 A0A1W2PRF3 423 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 A0A1W2PRM7 423 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms